RNA–Protein interactions for RNA: ENST00000587541.5

MADCAM1-204, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

TSL 2 BASIC

Gene MADCAM1, Length 1,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-204ENST00000587541 NISCHQ9Y2I1 1504 aa39.72■■■■□ 3.95
MADCAM1-204ENST00000587541 CCDC180Q9P1Z9 1646 aa34.91■■■■□ 3.18
MADCAM1-204ENST00000587541 ABCC9O60706 1549 aa33.36■■■□□ 2.93
MADCAM1-204ENST00000587541 ZCCHC6Q5VYS8 1495 aaKnown RBP33.29■■■□□ 2.92
MADCAM1-204ENST00000587541 DCAF1Q9Y4B6 1507 aa32.93■■■□□ 2.86
MADCAM1-204ENST00000587541 DCAF8L2P0C7V8 631 aa32.82■■■□□ 2.84
MADCAM1-204ENST00000587541 MYO15BQ96JP2 1530 aa32.71■■■□□ 2.83
MADCAM1-204ENST00000587541 NACADO15069 1562 aa32.59■■■□□ 2.81
MADCAM1-204ENST00000587541 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
MADCAM1-204ENST00000587541 SHROOM4Q9ULL8 1493 aa31.96■■■□□ 2.71
MADCAM1-204ENST00000587541 SCRIBQ14160 1630 aa31.91■■■□□ 2.7
MADCAM1-204ENST00000587541 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.66
MADCAM1-204ENST00000587541 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
MADCAM1-204ENST00000587541 PABPN1Q86U42 306 aaKnown RBP eCLIP31.35■■■□□ 2.61
MADCAM1-204ENST00000587541 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.52
MADCAM1-204ENST00000587541 BAZ1AQ9NRL2 1556 aaPredicted RBP30.74■■■□□ 2.51
MADCAM1-204ENST00000587541 RSF1Q96T23 1441 aaPredicted RBP30.63■■■□□ 2.49
MADCAM1-204ENST00000587541 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
MADCAM1-204ENST00000587541 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
MADCAM1-204ENST00000587541 SUPT5HO00267 1087 aaKnown RBP30.59■■■□□ 2.49
MADCAM1-204ENST00000587541 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
MADCAM1-204ENST00000587541 WIZO95785 1651 aa30.36■■■□□ 2.45
MADCAM1-204ENST00000587541 PEG3Q9GZU2 1588 aa30.31■■■□□ 2.44
MADCAM1-204ENST00000587541 SMARCA2P51531 1590 aa30.23■■■□□ 2.43
MADCAM1-204ENST00000587541 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
MADCAM1-204ENST00000587541 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
MADCAM1-204ENST00000587541 CC2D2AQ9P2K1 1620 aa30.16■■■□□ 2.42
MADCAM1-204ENST00000587541 TOP2AP11388 1531 aaKnown RBP30.08■■■□□ 2.41
MADCAM1-204ENST00000587541 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
MADCAM1-204ENST00000587541 BAZ1BQ9UIG0 1483 aaKnown RBP30.02■■■□□ 2.4
MADCAM1-204ENST00000587541 HMGXB3Q12766 1538 aa29.99■■■□□ 2.39
MADCAM1-204ENST00000587541 CCDC88BA6NC98 1476 aa29.73■■■□□ 2.35
MADCAM1-204ENST00000587541 CFTRP13569 1480 aa29.26■■■□□ 2.27
MADCAM1-204ENST00000587541 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
MADCAM1-204ENST00000587541 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
MADCAM1-204ENST00000587541 CHIC1Q5VXU3 224 aa29.12■■■□□ 2.25
MADCAM1-204ENST00000587541 LAMC3Q9Y6N6 1575 aa29.12■■■□□ 2.25
MADCAM1-204ENST00000587541 NESP48681 1621 aa29.1■■■□□ 2.25
MADCAM1-204ENST00000587541 ABCC8Q09428 1581 aa28.94■■■□□ 2.22
MADCAM1-204ENST00000587541 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.21
MADCAM1-204ENST00000587541 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
MADCAM1-204ENST00000587541 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
MADCAM1-204ENST00000587541 WRNQ14191 1432 aaPredicted RBP eCLIP28.86■■■□□ 2.21
MADCAM1-204ENST00000587541 CEP164Q9UPV0 1460 aa28.76■■■□□ 2.2
MADCAM1-204ENST00000587541 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
MADCAM1-204ENST00000587541 SYNJ1O43426 1573 aa28.73■■■□□ 2.19
MADCAM1-204ENST00000587541 TOP2BQ02880 1626 aa28.7■■■□□ 2.19
MADCAM1-204ENST00000587541 BIVM-ERCC5R4GMW8 1640 aa28.7■■■□□ 2.18
MADCAM1-204ENST00000587541 CUX1P39880 1505 aa28.67■■■□□ 2.18
MADCAM1-204ENST00000587541 ERCC6Q03468 1493 aa28.62■■■□□ 2.17
MADCAM1-204ENST00000587541 DNMBPQ6XZF7 1577 aa28.59■■■□□ 2.17
MADCAM1-204ENST00000587541 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
MADCAM1-204ENST00000587541 URB2Q14146 1524 aaKnown RBP28.53■■■□□ 2.16
MADCAM1-204ENST00000587541 MRC2Q9UBG0 1479 aa28.51■■■□□ 2.15
MADCAM1-204ENST00000587541 FGD5Q6ZNL6 1462 aa28.43■■■□□ 2.14
MADCAM1-204ENST00000587541 THOC2Q8NI27 1593 aaKnown RBP28.41■■■□□ 2.14
MADCAM1-204ENST00000587541 WDR62O43379 1518 aa28.38■■■□□ 2.13
MADCAM1-204ENST00000587541 POLA1P09884 1462 aaPredicted RBP28.35■■■□□ 2.13
MADCAM1-204ENST00000587541 SOGA1O94964 1423 aa28.3■■■□□ 2.12
MADCAM1-204ENST00000587541 EEA1Q15075 1411 aa28.3■■■□□ 2.12
MADCAM1-204ENST00000587541 FAM9AQ8IZU1 332 aaPredicted RBP28.22■■■□□ 2.11
MADCAM1-204ENST00000587541 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
MADCAM1-204ENST00000587541 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
MADCAM1-204ENST00000587541 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
MADCAM1-204ENST00000587541 KIF27Q86VH2 1401 aa28.19■■■□□ 2.1
MADCAM1-204ENST00000587541 CUX2O14529 1486 aa28.16■■■□□ 2.1
MADCAM1-204ENST00000587541 WDR97A6NE52 1622 aa28.16■■■□□ 2.1
MADCAM1-204ENST00000587541 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
MADCAM1-204ENST00000587541 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
MADCAM1-204ENST00000587541 CSRNP3Q8WYN3 585 aa28.12■■■□□ 2.09
MADCAM1-204ENST00000587541 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
MADCAM1-204ENST00000587541 TDRD9Q8NDG6 1382 aaKnown RBP27.98■■■□□ 2.07
MADCAM1-204ENST00000587541 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
MADCAM1-204ENST00000587541 IGF1RP08069 1367 aa27.94■■■□□ 2.06
MADCAM1-204ENST00000587541 KIF21BO75037 1637 aa27.93■■■□□ 2.06
MADCAM1-204ENST00000587541 LOC105371045A0A1W2PR82 267 aa27.92■■■□□ 2.06
MADCAM1-204ENST00000587541 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
MADCAM1-204ENST00000587541 ZNF608Q9ULD9 1512 aaPredicted RBP27.89■■■□□ 2.06
MADCAM1-204ENST00000587541 PRXQ9BXM0 1461 aa27.88■■■□□ 2.05
MADCAM1-204ENST00000587541 AQRO60306 1485 aaKnown RBP eCLIP27.87■■■□□ 2.05
MADCAM1-204ENST00000587541 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
MADCAM1-204ENST00000587541 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
MADCAM1-204ENST00000587541 CUL7Q14999 1698 aa27.84■■■□□ 2.05
MADCAM1-204ENST00000587541 GOLGA3Q08378 1498 aa27.84■■■□□ 2.05
MADCAM1-204ENST00000587541 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
MADCAM1-204ENST00000587541 CARMIL1Q5VZK9 1371 aa27.81■■■□□ 2.04
MADCAM1-204ENST00000587541 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
MADCAM1-204ENST00000587541 RAPGEF2Q9Y4G8 1499 aa27.77■■■□□ 2.04
MADCAM1-204ENST00000587541 UBTFP17480 764 aaKnown RBP27.69■■■□□ 2.02
MADCAM1-204ENST00000587541 TNIKQ9UKE5 1360 aa27.68■■■□□ 2.02
MADCAM1-204ENST00000587541 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
MADCAM1-204ENST00000587541 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
MADCAM1-204ENST00000587541 MAGI1Q96QZ7 1491 aaPredicted RBP27.65■■■□□ 2.02
MADCAM1-204ENST00000587541 SNAPC4Q5SXM2 1469 aa27.63■■■□□ 2.01
MADCAM1-204ENST00000587541 SYNJ2O15056 1496 aa27.52■■■□□ 2
MADCAM1-204ENST00000587541 CTTNBP2Q8WZ74 1663 aa27.46■■□□□ 1.99
MADCAM1-204ENST00000587541 CEP162Q5TB80 1403 aa27.46■■□□□ 1.99
MADCAM1-204ENST00000587541 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
MADCAM1-204ENST00000587541 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
MADCAM1-204ENST00000587541 FBLN2P98095 1184 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms