RNA–Protein interactions for RNA: ENST00000629241.2

KCNQ2-215, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5 BASIC

Gene KCNQ2, Length 2,853 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-215ENST00000629241 NISCHQ9Y2I1 1504 aa37.79■■■■□ 3.64
KCNQ2-215ENST00000629241 CCDC180Q9P1Z9 1646 aa32.46■■■□□ 2.79
KCNQ2-215ENST00000629241 DCAF8L2P0C7V8 631 aa32.16■■■□□ 2.74
KCNQ2-215ENST00000629241 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
KCNQ2-215ENST00000629241 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
KCNQ2-215ENST00000629241 ABCC9O60706 1549 aa31.38■■■□□ 2.61
KCNQ2-215ENST00000629241 DCAF1Q9Y4B6 1507 aa30.8■■■□□ 2.52
KCNQ2-215ENST00000629241 SUPT5HO00267 1087 aaKnown RBP30.77■■■□□ 2.52
KCNQ2-215ENST00000629241 SCRIBQ14160 1630 aa30.57■■■□□ 2.48
KCNQ2-215ENST00000629241 NACADO15069 1562 aa30.31■■■□□ 2.44
KCNQ2-215ENST00000629241 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
KCNQ2-215ENST00000629241 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
KCNQ2-215ENST00000629241 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.38
KCNQ2-215ENST00000629241 CECR2Q9BXF3 1484 aa29.71■■■□□ 2.35
KCNQ2-215ENST00000629241 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
KCNQ2-215ENST00000629241 RSF1Q96T23 1441 aaPredicted RBP29.57■■■□□ 2.32
KCNQ2-215ENST00000629241 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
KCNQ2-215ENST00000629241 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
KCNQ2-215ENST00000629241 WIZO95785 1651 aa29.23■■■□□ 2.27
KCNQ2-215ENST00000629241 CHIC1Q5VXU3 224 aa29.19■■■□□ 2.26
KCNQ2-215ENST00000629241 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
KCNQ2-215ENST00000629241 SMARCA4P51532 1647 aa29■■■□□ 2.23
KCNQ2-215ENST00000629241 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
KCNQ2-215ENST00000629241 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
KCNQ2-215ENST00000629241 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
KCNQ2-215ENST00000629241 FAM9AQ8IZU1 332 aaPredicted RBP28.56■■■□□ 2.16
KCNQ2-215ENST00000629241 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
KCNQ2-215ENST00000629241 EHMT2Q96KQ7 1210 aa28.53■■■□□ 2.16
KCNQ2-215ENST00000629241 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
KCNQ2-215ENST00000629241 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
KCNQ2-215ENST00000629241 LOC105371045A0A1W2PR82 267 aa28.47■■■□□ 2.15
KCNQ2-215ENST00000629241 BAZ1BQ9UIG0 1483 aaKnown RBP28.46■■■□□ 2.15
KCNQ2-215ENST00000629241 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
KCNQ2-215ENST00000629241 ABCC8Q09428 1581 aa28.29■■■□□ 2.12
KCNQ2-215ENST00000629241 NCAPD3P42695 1498 aa28.1■■■□□ 2.09
KCNQ2-215ENST00000629241 CC2D2AQ9P2K1 1620 aa28.09■■■□□ 2.09
KCNQ2-215ENST00000629241 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
KCNQ2-215ENST00000629241 HMGXB3Q12766 1538 aa27.96■■■□□ 2.07
KCNQ2-215ENST00000629241 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
KCNQ2-215ENST00000629241 SOGA1O94964 1423 aa27.8■■■□□ 2.04
KCNQ2-215ENST00000629241 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
KCNQ2-215ENST00000629241 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
KCNQ2-215ENST00000629241 CFTRP13569 1480 aa27.62■■■□□ 2.01
KCNQ2-215ENST00000629241 NESP48681 1621 aa27.61■■■□□ 2.01
KCNQ2-215ENST00000629241 CADPSQ9ULU8 1353 aa27.58■■■□□ 2.01
KCNQ2-215ENST00000629241 CSRNP3Q8WYN3 585 aa27.5■■□□□ 1.99
KCNQ2-215ENST00000629241 RANGAP1P46060 587 aaPredicted RBP27.47■■□□□ 1.99
KCNQ2-215ENST00000629241 UBTFP17480 764 aaKnown RBP27.47■■□□□ 1.99
KCNQ2-215ENST00000629241 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.98
KCNQ2-215ENST00000629241 CUX1P39880 1505 aa27.44■■□□□ 1.98
KCNQ2-215ENST00000629241 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
KCNQ2-215ENST00000629241 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
KCNQ2-215ENST00000629241 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
KCNQ2-215ENST00000629241 TTBK1Q5TCY1 1321 aaPredicted RBP27.29■■□□□ 1.96
KCNQ2-215ENST00000629241 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
KCNQ2-215ENST00000629241 PRDM2Q13029 1718 aa27.19■■□□□ 1.94
KCNQ2-215ENST00000629241 EEA1Q15075 1411 aa27.19■■□□□ 1.94
KCNQ2-215ENST00000629241 FGD5Q6ZNL6 1462 aa27.15■■□□□ 1.94
KCNQ2-215ENST00000629241 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.93
KCNQ2-215ENST00000629241 CEP162Q5TB80 1403 aa27.11■■□□□ 1.93
KCNQ2-215ENST00000629241 CUX2O14529 1486 aa27.1■■□□□ 1.93
KCNQ2-215ENST00000629241 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
KCNQ2-215ENST00000629241 GOLGA3Q08378 1498 aa27.09■■□□□ 1.93
KCNQ2-215ENST00000629241 CEP164Q9UPV0 1460 aa27.09■■□□□ 1.93
KCNQ2-215ENST00000629241 LAMC3Q9Y6N6 1575 aa27.05■■□□□ 1.92
KCNQ2-215ENST00000629241 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
KCNQ2-215ENST00000629241 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
KCNQ2-215ENST00000629241 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
KCNQ2-215ENST00000629241 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
KCNQ2-215ENST00000629241 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
KCNQ2-215ENST00000629241 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
KCNQ2-215ENST00000629241 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
KCNQ2-215ENST00000629241 DNMBPQ6XZF7 1577 aa26.93■■□□□ 1.9
KCNQ2-215ENST00000629241 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
KCNQ2-215ENST00000629241 KIF21BO75037 1637 aa26.9■■□□□ 1.9
KCNQ2-215ENST00000629241 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
KCNQ2-215ENST00000629241 IGF1RP08069 1367 aa26.87■■□□□ 1.89
KCNQ2-215ENST00000629241 PRXQ9BXM0 1461 aa26.84■■□□□ 1.89
KCNQ2-215ENST00000629241 CLIP1P30622 1438 aa26.84■■□□□ 1.89
KCNQ2-215ENST00000629241 CARMIL1Q5VZK9 1371 aa26.77■■□□□ 1.88
KCNQ2-215ENST00000629241 ERCC6Q03468 1493 aa26.77■■□□□ 1.88
KCNQ2-215ENST00000629241 P3H3Q8IVL6 736 aa26.71■■□□□ 1.87
KCNQ2-215ENST00000629241 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
KCNQ2-215ENST00000629241 ERICH3Q5RHP9 1530 aa26.64■■□□□ 1.86
KCNQ2-215ENST00000629241 MRC2Q9UBG0 1479 aa26.64■■□□□ 1.85
KCNQ2-215ENST00000629241 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.85
KCNQ2-215ENST00000629241 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
KCNQ2-215ENST00000629241 ZNF608Q9ULD9 1512 aaPredicted RBP26.53■■□□□ 1.84
KCNQ2-215ENST00000629241 APLP2Q06481 763 aa26.53■■□□□ 1.84
KCNQ2-215ENST00000629241 ATP1B4Q9UN42 357 aaPredicted RBP26.52■■□□□ 1.84
KCNQ2-215ENST00000629241 ARAP1Q96P48 1450 aa26.51■■□□□ 1.83
KCNQ2-215ENST00000629241 VPS8Q8N3P4 1428 aa26.49■■□□□ 1.83
KCNQ2-215ENST00000629241 TARBP1Q13395 1621 aaKnown RBP26.48■■□□□ 1.83
KCNQ2-215ENST00000629241 WDR97A6NE52 1622 aa26.48■■□□□ 1.83
KCNQ2-215ENST00000629241 ARHGAP35Q9NRY4 1499 aa26.44■■□□□ 1.82
KCNQ2-215ENST00000629241 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
KCNQ2-215ENST00000629241 HRCP23327 699 aa26.41■■□□□ 1.82
KCNQ2-215ENST00000629241 FBLN2P98095 1184 aa26.41■■□□□ 1.82
KCNQ2-215ENST00000629241 WDR62O43379 1518 aa26.39■■□□□ 1.81
KCNQ2-215ENST00000629241 KANK4Q5T7N3 995 aaPredicted RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms