Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
IDH3AP50213 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
IDH3AP50213 TOP3BP1-201ENST00000420768 1380 ntBASIC16.26■□□□□ 0.19
IDH3AP50213 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 LINC02447-202ENST00000501888 2146 ntBASIC16.25■□□□□ 0.19
IDH3AP50213 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.25■□□□□ 0.19
IDH3AP50213 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 RCN1P2-201ENST00000398357 915 ntBASIC16.25■□□□□ 0.19
IDH3AP50213 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
IDH3AP50213 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.25■□□□□ 0.19
IDH3AP50213 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 SIGLEC16-201ENST00000599858 1437 ntBASIC16.25■□□□□ 0.19
IDH3AP50213 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
IDH3AP50213 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.25■□□□□ 0.19
IDH3AP50213 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
IDH3AP50213 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.24■□□□□ 0.19
IDH3AP50213 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 AC104076.2-201ENST00000448912 469 ntBASIC16.24■□□□□ 0.19
IDH3AP50213 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.24■□□□□ 0.19
IDH3AP50213 NTF6B-201ENST00000591913 560 ntBASIC16.24■□□□□ 0.19
IDH3AP50213 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.24■□□□□ 0.19
IDH3AP50213 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 KRT8P39-201ENST00000396270 1433 ntBASIC16.24■□□□□ 0.19
IDH3AP50213 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
IDH3AP50213 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.24■□□□□ 0.19
IDH3AP50213 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.24■□□□□ 0.19
IDH3AP50213 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IDH3AP50213 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.23■□□□□ 0.19
IDH3AP50213 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.23■□□□□ 0.19
IDH3AP50213 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms