RNA–Protein interactions for RNA: ENST00000409249.5

LOXL3-203, Transcript of lysyl oxidase like 3, humanhuman

TSL 5 BASIC

Gene LOXL3, Length 2,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-203ENST00000409249 NISCHQ9Y2I1 1504 aa35.08■■■■□ 3.21
LOXL3-203ENST00000409249 CCDC180Q9P1Z9 1646 aa30.13■■■□□ 2.41
LOXL3-203ENST00000409249 ZCCHC6Q5VYS8 1495 aaKnown RBP29.53■■■□□ 2.32
LOXL3-203ENST00000409249 SHROOM4Q9ULL8 1493 aa29.43■■■□□ 2.3
LOXL3-203ENST00000409249 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
LOXL3-203ENST00000409249 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
LOXL3-203ENST00000409249 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
LOXL3-203ENST00000409249 ABCC9O60706 1549 aa28.48■■■□□ 2.15
LOXL3-203ENST00000409249 MYO15BQ96JP2 1530 aa28.21■■■□□ 2.11
LOXL3-203ENST00000409249 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
LOXL3-203ENST00000409249 NACADO15069 1562 aa28.04■■■□□ 2.08
LOXL3-203ENST00000409249 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
LOXL3-203ENST00000409249 RSF1Q96T23 1441 aaPredicted RBP27.51■■□□□ 1.99
LOXL3-203ENST00000409249 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
LOXL3-203ENST00000409249 CECR2Q9BXF3 1484 aa27.4■■□□□ 1.98
LOXL3-203ENST00000409249 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
LOXL3-203ENST00000409249 MROH2BQ7Z745 1585 aa27.23■■□□□ 1.95
LOXL3-203ENST00000409249 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
LOXL3-203ENST00000409249 WIZO95785 1651 aa27.05■■□□□ 1.92
LOXL3-203ENST00000409249 BAZ1AQ9NRL2 1556 aaPredicted RBP27■■□□□ 1.91
LOXL3-203ENST00000409249 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.9
LOXL3-203ENST00000409249 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
LOXL3-203ENST00000409249 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
LOXL3-203ENST00000409249 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
LOXL3-203ENST00000409249 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
LOXL3-203ENST00000409249 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
LOXL3-203ENST00000409249 SMARCA2P51531 1590 aa26.45■■□□□ 1.82
LOXL3-203ENST00000409249 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
LOXL3-203ENST00000409249 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
LOXL3-203ENST00000409249 EIF4G1Q04637 1599 aaKnown RBP26.34■■□□□ 1.81
LOXL3-203ENST00000409249 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
LOXL3-203ENST00000409249 HRCP23327 699 aa26.27■■□□□ 1.8
LOXL3-203ENST00000409249 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
LOXL3-203ENST00000409249 EHMT2Q96KQ7 1210 aa26.22■■□□□ 1.79
LOXL3-203ENST00000409249 ABCC8Q09428 1581 aa26.2■■□□□ 1.78
LOXL3-203ENST00000409249 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
LOXL3-203ENST00000409249 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
LOXL3-203ENST00000409249 WRNQ14191 1432 aaPredicted RBP eCLIP25.87■■□□□ 1.73
LOXL3-203ENST00000409249 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
LOXL3-203ENST00000409249 SOGA1O94964 1423 aa25.84■■□□□ 1.73
LOXL3-203ENST00000409249 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
LOXL3-203ENST00000409249 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
LOXL3-203ENST00000409249 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
LOXL3-203ENST00000409249 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
LOXL3-203ENST00000409249 CC2D2AQ9P2K1 1620 aa25.64■■□□□ 1.7
LOXL3-203ENST00000409249 EEA1Q15075 1411 aa25.6■■□□□ 1.69
LOXL3-203ENST00000409249 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
LOXL3-203ENST00000409249 CFTRP13569 1480 aa25.55■■□□□ 1.68
LOXL3-203ENST00000409249 UBTFP17480 764 aaKnown RBP25.53■■□□□ 1.68
LOXL3-203ENST00000409249 TOP2BQ02880 1626 aa25.49■■□□□ 1.67
LOXL3-203ENST00000409249 TNIKQ9UKE5 1360 aa25.43■■□□□ 1.66
LOXL3-203ENST00000409249 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
LOXL3-203ENST00000409249 CEP162Q5TB80 1403 aa25.4■■□□□ 1.66
LOXL3-203ENST00000409249 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
LOXL3-203ENST00000409249 CUX1P39880 1505 aa25.39■■□□□ 1.66
LOXL3-203ENST00000409249 GOLGA3Q08378 1498 aa25.39■■□□□ 1.66
LOXL3-203ENST00000409249 CEP164Q9UPV0 1460 aa25.32■■□□□ 1.64
LOXL3-203ENST00000409249 PRDM2Q13029 1718 aa25.28■■□□□ 1.64
LOXL3-203ENST00000409249 KIF21BO75037 1637 aa25.26■■□□□ 1.63
LOXL3-203ENST00000409249 RAPGEF2Q9Y4G8 1499 aa25.24■■□□□ 1.63
LOXL3-203ENST00000409249 DNAJC5BQ9UF47 199 aa25.2■■□□□ 1.62
LOXL3-203ENST00000409249 RANGAP1P46060 587 aaPredicted RBP25.2■■□□□ 1.62
LOXL3-203ENST00000409249 TTBK1Q5TCY1 1321 aaPredicted RBP25.19■■□□□ 1.62
LOXL3-203ENST00000409249 NESP48681 1621 aa25.17■■□□□ 1.62
LOXL3-203ENST00000409249 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
LOXL3-203ENST00000409249 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
LOXL3-203ENST00000409249 CLIP1P30622 1438 aa25.09■■□□□ 1.61
LOXL3-203ENST00000409249 PRXQ9BXM0 1461 aa25.07■■□□□ 1.6
LOXL3-203ENST00000409249 FGD5Q6ZNL6 1462 aa25.06■■□□□ 1.6
LOXL3-203ENST00000409249 CUX2O14529 1486 aa25.04■■□□□ 1.6
LOXL3-203ENST00000409249 ZEB1P37275 1124 aaPredicted RBP24.99■■□□□ 1.59
LOXL3-203ENST00000409249 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
LOXL3-203ENST00000409249 IGF1RP08069 1367 aa24.94■■□□□ 1.58
LOXL3-203ENST00000409249 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
LOXL3-203ENST00000409249 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
LOXL3-203ENST00000409249 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
LOXL3-203ENST00000409249 RAD54L2Q9Y4B4 1467 aa24.9■■□□□ 1.58
LOXL3-203ENST00000409249 VPS8Q8N3P4 1428 aa24.88■■□□□ 1.57
LOXL3-203ENST00000409249 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
LOXL3-203ENST00000409249 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
LOXL3-203ENST00000409249 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
LOXL3-203ENST00000409249 APLP2Q06481 763 aa24.82■■□□□ 1.56
LOXL3-203ENST00000409249 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
LOXL3-203ENST00000409249 ABCA10Q8WWZ4 1543 aa24.75■■□□□ 1.55
LOXL3-203ENST00000409249 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
LOXL3-203ENST00000409249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.73■■□□□ 1.55
LOXL3-203ENST00000409249 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
LOXL3-203ENST00000409249 ARHGAP35Q9NRY4 1499 aa24.66■■□□□ 1.54
LOXL3-203ENST00000409249 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
LOXL3-203ENST00000409249 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
LOXL3-203ENST00000409249 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.53
LOXL3-203ENST00000409249 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
LOXL3-203ENST00000409249 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
LOXL3-203ENST00000409249 P3H3Q8IVL6 736 aa24.54■■□□□ 1.52
LOXL3-203ENST00000409249 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
LOXL3-203ENST00000409249 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
LOXL3-203ENST00000409249 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
LOXL3-203ENST00000409249 CUL7Q14999 1698 aa24.49■■□□□ 1.51
LOXL3-203ENST00000409249 ABCA5Q8WWZ7 1642 aa24.47■■□□□ 1.51
LOXL3-203ENST00000409249 MRC2Q9UBG0 1479 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms