RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 NISCHQ9Y2I1 1504 aa44.7■■■■■ 4.75
SSR4P1-202ENST00000429427 CCDC180Q9P1Z9 1646 aa39.8■■■■□ 3.96
SSR4P1-202ENST00000429427 ABCC9O60706 1549 aa39.24■■■■□ 3.87
SSR4P1-202ENST00000429427 RB1CC1Q8TDY2 1594 aa37.55■■■■□ 3.6
SSR4P1-202ENST00000429427 NACADO15069 1562 aa37.46■■■■□ 3.59
SSR4P1-202ENST00000429427 DCAF8L2P0C7V8 631 aa37.33■■■■□ 3.57
SSR4P1-202ENST00000429427 ZCCHC6Q5VYS8 1495 aaKnown RBP37.2■■■■□ 3.55
SSR4P1-202ENST00000429427 MYO15BQ96JP2 1530 aa37.18■■■■□ 3.54
SSR4P1-202ENST00000429427 DCAF1Q9Y4B6 1507 aa36.95■■■■□ 3.5
SSR4P1-202ENST00000429427 UNC13AQ9UPW8 1703 aa36.78■■■■□ 3.48
SSR4P1-202ENST00000429427 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
SSR4P1-202ENST00000429427 BICRAQ9NZM4 1560 aa36.57■■■■□ 3.45
SSR4P1-202ENST00000429427 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
SSR4P1-202ENST00000429427 DNAJC5BQ9UF47 199 aa36.34■■■■□ 3.41
SSR4P1-202ENST00000429427 SHROOM4Q9ULL8 1493 aa36.03■■■■□ 3.36
SSR4P1-202ENST00000429427 EIF4G1Q04637 1599 aaKnown RBP35.56■■■■□ 3.28
SSR4P1-202ENST00000429427 CC2D2AQ9P2K1 1620 aa35.47■■■■□ 3.27
SSR4P1-202ENST00000429427 CECR2Q9BXF3 1484 aa35.27■■■■□ 3.24
SSR4P1-202ENST00000429427 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
SSR4P1-202ENST00000429427 NCAPD3P42695 1498 aa34.62■■■■□ 3.13
SSR4P1-202ENST00000429427 ATAD2BQ9ULI0 1458 aa34.62■■■■□ 3.13
SSR4P1-202ENST00000429427 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
SSR4P1-202ENST00000429427 SMARCA2P51531 1590 aa34.49■■■■□ 3.11
SSR4P1-202ENST00000429427 MROH2BQ7Z745 1585 aa34.49■■■■□ 3.11
SSR4P1-202ENST00000429427 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
SSR4P1-202ENST00000429427 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
SSR4P1-202ENST00000429427 BAZ1BQ9UIG0 1483 aaKnown RBP34.27■■■■□ 3.08
SSR4P1-202ENST00000429427 WIZO95785 1651 aa34.07■■■■□ 3.04
SSR4P1-202ENST00000429427 RSF1Q96T23 1441 aaPredicted RBP33.98■■■■□ 3.03
SSR4P1-202ENST00000429427 NESP48681 1621 aa33.93■■■■□ 3.02
SSR4P1-202ENST00000429427 ERCC6Q03468 1493 aa33.76■■■□□ 2.99
SSR4P1-202ENST00000429427 LAMC3Q9Y6N6 1575 aa33.7■■■□□ 2.99
SSR4P1-202ENST00000429427 TOP2AP11388 1531 aaKnown RBP33.67■■■□□ 2.98
SSR4P1-202ENST00000429427 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
SSR4P1-202ENST00000429427 CUX2O14529 1486 aa33.52■■■□□ 2.96
SSR4P1-202ENST00000429427 KIF21AQ7Z4S6 1674 aa33.47■■■□□ 2.95
SSR4P1-202ENST00000429427 THOC2Q8NI27 1593 aaKnown RBP33.46■■■□□ 2.95
SSR4P1-202ENST00000429427 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.95
SSR4P1-202ENST00000429427 CFTRP13569 1480 aa33.36■■■□□ 2.93
SSR4P1-202ENST00000429427 CCDC88BA6NC98 1476 aa33.3■■■□□ 2.92
SSR4P1-202ENST00000429427 FANCD2Q9BXW9 1451 aa33.2■■■□□ 2.91
SSR4P1-202ENST00000429427 MRC2Q9UBG0 1479 aa33.18■■■□□ 2.9
SSR4P1-202ENST00000429427 CEP164Q9UPV0 1460 aa33.16■■■□□ 2.9
SSR4P1-202ENST00000429427 WDR62O43379 1518 aa33.12■■■□□ 2.89
SSR4P1-202ENST00000429427 PRDM2Q13029 1718 aa33.01■■■□□ 2.87
SSR4P1-202ENST00000429427 URB2Q14146 1524 aaKnown RBP32.95■■■□□ 2.87
SSR4P1-202ENST00000429427 SUPT5HO00267 1087 aaKnown RBP32.84■■■□□ 2.85
SSR4P1-202ENST00000429427 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
SSR4P1-202ENST00000429427 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
SSR4P1-202ENST00000429427 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
SSR4P1-202ENST00000429427 ABCC8Q09428 1581 aa32.53■■■□□ 2.8
SSR4P1-202ENST00000429427 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
SSR4P1-202ENST00000429427 ZNF608Q9ULD9 1512 aaPredicted RBP32.45■■■□□ 2.78
SSR4P1-202ENST00000429427 POLA1P09884 1462 aaPredicted RBP32.38■■■□□ 2.77
SSR4P1-202ENST00000429427 CUX1P39880 1505 aa32.36■■■□□ 2.77
SSR4P1-202ENST00000429427 TARBP1Q13395 1621 aaKnown RBP32.36■■■□□ 2.77
SSR4P1-202ENST00000429427 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
SSR4P1-202ENST00000429427 EIF4G3O43432 1585 aaKnown RBP32.26■■■□□ 2.75
SSR4P1-202ENST00000429427 FGD5Q6ZNL6 1462 aa32.25■■■□□ 2.75
SSR4P1-202ENST00000429427 AQRO60306 1485 aaKnown RBP eCLIP32.19■■■□□ 2.74
SSR4P1-202ENST00000429427 SOGA1O94964 1423 aa32.18■■■□□ 2.74
SSR4P1-202ENST00000429427 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
SSR4P1-202ENST00000429427 OSCARQ8IYS5 282 aa32.04■■■□□ 2.72
SSR4P1-202ENST00000429427 WDR97A6NE52 1622 aa32.02■■■□□ 2.72
SSR4P1-202ENST00000429427 SYNJ1O43426 1573 aa32■■■□□ 2.71
SSR4P1-202ENST00000429427 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
SSR4P1-202ENST00000429427 TOP2BQ02880 1626 aa31.97■■■□□ 2.71
SSR4P1-202ENST00000429427 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
SSR4P1-202ENST00000429427 ABCA10Q8WWZ4 1543 aa31.92■■■□□ 2.7
SSR4P1-202ENST00000429427 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
SSR4P1-202ENST00000429427 CHD1O14646 1710 aa31.88■■■□□ 2.69
SSR4P1-202ENST00000429427 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
SSR4P1-202ENST00000429427 ABCA5Q8WWZ7 1642 aa31.84■■■□□ 2.69
SSR4P1-202ENST00000429427 GAPVD1Q14C86 1478 aa31.82■■■□□ 2.68
SSR4P1-202ENST00000429427 MAGI1Q96QZ7 1491 aaPredicted RBP31.78■■■□□ 2.68
SSR4P1-202ENST00000429427 PBRM1Q86U86 1689 aa31.76■■■□□ 2.68
SSR4P1-202ENST00000429427 FBLN2P98095 1184 aa31.75■■■□□ 2.67
SSR4P1-202ENST00000429427 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
SSR4P1-202ENST00000429427 RIMBP3CA6NJZ7 1639 aa31.64■■■□□ 2.66
SSR4P1-202ENST00000429427 RIMBP3BA6NNM3 1639 aa31.64■■■□□ 2.66
SSR4P1-202ENST00000429427 RIMBP3Q9UFD9 1639 aa31.64■■■□□ 2.66
SSR4P1-202ENST00000429427 ARHGEF11O15085 1522 aa31.62■■■□□ 2.65
SSR4P1-202ENST00000429427 CHMP7Q8WUX9 453 aaPredicted RBP31.61■■■□□ 2.65
SSR4P1-202ENST00000429427 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
SSR4P1-202ENST00000429427 CLASP1Q7Z460 1538 aa31.58■■■□□ 2.65
SSR4P1-202ENST00000429427 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
SSR4P1-202ENST00000429427 ERICH3Q5RHP9 1530 aa31.5■■■□□ 2.63
SSR4P1-202ENST00000429427 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
SSR4P1-202ENST00000429427 FHAD1B1AJZ9 1412 aa31.43■■■□□ 2.62
SSR4P1-202ENST00000429427 ARAP1Q96P48 1450 aa31.39■■■□□ 2.62
SSR4P1-202ENST00000429427 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
SSR4P1-202ENST00000429427 NUP160Q12769 1436 aa31.36■■■□□ 2.61
SSR4P1-202ENST00000429427 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
SSR4P1-202ENST00000429427 CYB5RLQ6IPT4 315 aa31.28■■■□□ 2.6
SSR4P1-202ENST00000429427 IGF1RP08069 1367 aa31.28■■■□□ 2.6
SSR4P1-202ENST00000429427 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
SSR4P1-202ENST00000429427 SHROOM2Q13796 1616 aa31.15■■■□□ 2.58
SSR4P1-202ENST00000429427 CUL7Q14999 1698 aa31.13■■■□□ 2.57
SSR4P1-202ENST00000429427 RUSC2Q8N2Y8 1516 aa31.1■■■□□ 2.57
SSR4P1-202ENST00000429427 CARMIL1Q5VZK9 1371 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms