Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CD248Q9HCU0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CD248Q9HCU0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.86■■□□□ 1.57
CD248Q9HCU0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.86■■□□□ 1.57
CD248Q9HCU0 AC074183.2-201ENST00000623112 922 ntBASIC24.86■■□□□ 1.57
CD248Q9HCU0 AL035685.1-201ENST00000636663 812 ntBASIC24.86■■□□□ 1.57
CD248Q9HCU0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CD248Q9HCU0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CD248Q9HCU0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CD248Q9HCU0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.85■■□□□ 1.57
CD248Q9HCU0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CD248Q9HCU0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.85■■□□□ 1.57
CD248Q9HCU0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CD248Q9HCU0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.84■■□□□ 1.57
CD248Q9HCU0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CD248Q9HCU0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
CD248Q9HCU0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CD248Q9HCU0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CD248Q9HCU0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.84■■□□□ 1.57
CD248Q9HCU0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CD248Q9HCU0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.83■■□□□ 1.57
CD248Q9HCU0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CD248Q9HCU0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.83■■□□□ 1.57
CD248Q9HCU0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.83■■□□□ 1.57
CD248Q9HCU0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CD248Q9HCU0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CD248Q9HCU0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CD248Q9HCU0 AC103834.1-201ENST00000520383 144 ntBASIC24.83■■□□□ 1.57
CD248Q9HCU0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CD248Q9HCU0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CD248Q9HCU0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CD248Q9HCU0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CD248Q9HCU0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CD248Q9HCU0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.81■■□□□ 1.56
CD248Q9HCU0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.81■■□□□ 1.56
CD248Q9HCU0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CD248Q9HCU0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CD248Q9HCU0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.81■■□□□ 1.56
CD248Q9HCU0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC24.81■■□□□ 1.56
CD248Q9HCU0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CD248Q9HCU0 AC133561.1-201ENST00000568600 2415 ntBASIC24.8■■□□□ 1.56
CD248Q9HCU0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.8■■□□□ 1.56
CD248Q9HCU0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CD248Q9HCU0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CD248Q9HCU0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CD248Q9HCU0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CD248Q9HCU0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.79■■□□□ 1.56
CD248Q9HCU0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.79■■□□□ 1.56
CD248Q9HCU0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.79■■□□□ 1.56
CD248Q9HCU0 AC018755.3-202ENST00000596210 929 ntBASIC24.79■■□□□ 1.56
CD248Q9HCU0 BHLHE23-202ENST00000612929 1109 ntBASIC24.79■■□□□ 1.56
CD248Q9HCU0 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.79■■□□□ 1.56
CD248Q9HCU0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
CD248Q9HCU0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CD248Q9HCU0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CD248Q9HCU0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CD248Q9HCU0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.78■■□□□ 1.56
CD248Q9HCU0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CD248Q9HCU0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CD248Q9HCU0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.78■■□□□ 1.56
CD248Q9HCU0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CD248Q9HCU0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CD248Q9HCU0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CD248Q9HCU0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.77■■□□□ 1.56
CD248Q9HCU0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.76■■□□□ 1.55
CD248Q9HCU0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CD248Q9HCU0 AC139795.1-202ENST00000500444 432 ntBASIC24.75■■□□□ 1.55
CD248Q9HCU0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CD248Q9HCU0 KRT8P33-201ENST00000508125 1423 ntBASIC24.75■■□□□ 1.55
CD248Q9HCU0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CD248Q9HCU0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CD248Q9HCU0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CD248Q9HCU0 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CD248Q9HCU0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.74■■□□□ 1.55
CD248Q9HCU0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CD248Q9HCU0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CD248Q9HCU0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms