Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.01■■■■□ 3.19
CD248Q9HCU0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.39■■■■□ 3.1
CD248Q9HCU0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.16■■■■□ 3.06
CD248Q9HCU0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.08■■■■□ 3.05
CD248Q9HCU0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.84■■■■□ 3.01
CD248Q9HCU0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
CD248Q9HCU0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
CD248Q9HCU0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.72■■■□□ 2.99
CD248Q9HCU0 AL356512.1-201ENST00000607453 1739 ntBASIC33.54■■■□□ 2.96
CD248Q9HCU0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.25■■■□□ 2.91
CD248Q9HCU0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
CD248Q9HCU0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.8■■■□□ 2.84
CD248Q9HCU0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
CD248Q9HCU0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.71■■■□□ 2.83
CD248Q9HCU0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.7■■■□□ 2.83
CD248Q9HCU0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.7■■■□□ 2.83
CD248Q9HCU0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
CD248Q9HCU0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.51■■■□□ 2.8
CD248Q9HCU0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CD248Q9HCU0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.48■■■□□ 2.79
CD248Q9HCU0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CD248Q9HCU0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CD248Q9HCU0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
CD248Q9HCU0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CD248Q9HCU0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.29■■■□□ 2.76
CD248Q9HCU0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CD248Q9HCU0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CD248Q9HCU0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.1■■■□□ 2.73
CD248Q9HCU0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
CD248Q9HCU0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.04■■■□□ 2.72
CD248Q9HCU0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CD248Q9HCU0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
CD248Q9HCU0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CD248Q9HCU0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CD248Q9HCU0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CD248Q9HCU0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CD248Q9HCU0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.74■■■□□ 2.67
CD248Q9HCU0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.67■■■□□ 2.66
CD248Q9HCU0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CD248Q9HCU0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CD248Q9HCU0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CD248Q9HCU0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD248Q9HCU0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CD248Q9HCU0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CD248Q9HCU0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.29■■■□□ 2.6
CD248Q9HCU0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CD248Q9HCU0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
CD248Q9HCU0 AC015813.7-201ENST00000623294 581 ntBASIC31.23■■■□□ 2.59
CD248Q9HCU0 AC006077.2-201ENST00000623591 457 ntBASIC31.2■■■□□ 2.59
CD248Q9HCU0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.19■■■□□ 2.58
CD248Q9HCU0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.17■■■□□ 2.58
CD248Q9HCU0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CD248Q9HCU0 ZNRF2P1-201ENST00000441407 443 ntBASIC31.15■■■□□ 2.58
CD248Q9HCU0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
CD248Q9HCU0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CD248Q9HCU0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.02■■■□□ 2.56
CD248Q9HCU0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CD248Q9HCU0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
CD248Q9HCU0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
CD248Q9HCU0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CD248Q9HCU0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CD248Q9HCU0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CD248Q9HCU0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
CD248Q9HCU0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CD248Q9HCU0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.61■■■□□ 2.49
CD248Q9HCU0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CD248Q9HCU0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
CD248Q9HCU0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CD248Q9HCU0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
CD248Q9HCU0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CD248Q9HCU0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CD248Q9HCU0 AP002365.1-201ENST00000603448 772 ntBASIC30.37■■■□□ 2.45
CD248Q9HCU0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.34■■■□□ 2.45
CD248Q9HCU0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CD248Q9HCU0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.27■■■□□ 2.44
CD248Q9HCU0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CD248Q9HCU0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.27■■■□□ 2.44
CD248Q9HCU0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.25■■■□□ 2.43
CD248Q9HCU0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
CD248Q9HCU0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.23■■■□□ 2.43
CD248Q9HCU0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CD248Q9HCU0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CD248Q9HCU0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.2■■■□□ 2.43
CD248Q9HCU0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CD248Q9HCU0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CD248Q9HCU0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
CD248Q9HCU0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CD248Q9HCU0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CD248Q9HCU0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CD248Q9HCU0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CD248Q9HCU0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CD248Q9HCU0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.1■■■□□ 2.41
CD248Q9HCU0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
CD248Q9HCU0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CD248Q9HCU0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.06■■■□□ 2.4
CD248Q9HCU0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.06■■■□□ 2.4
CD248Q9HCU0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CD248Q9HCU0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CD248Q9HCU0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.05■■■□□ 2.4
CD248Q9HCU0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms