Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSMEM1Q8WWF3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.64■□□□□ 0.73
SSMEM1Q8WWF3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 AP004609.3-201ENST00000610705 1884 ntBASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.63■□□□□ 0.73
SSMEM1Q8WWF3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SSMEM1Q8WWF3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSMEM1Q8WWF3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSMEM1Q8WWF3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 AC010980.1-201ENST00000587192 1142 ntBASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSMEM1Q8WWF3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSMEM1Q8WWF3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSMEM1Q8WWF3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SSMEM1Q8WWF3 YBX1P4-201ENST00000392794 808 ntBASIC19.58■□□□□ 0.72
SSMEM1Q8WWF3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.58■□□□□ 0.72
SSMEM1Q8WWF3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSMEM1Q8WWF3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSMEM1Q8WWF3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SSMEM1Q8WWF3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SSMEM1Q8WWF3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSMEM1Q8WWF3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 KRT8P33-201ENST00000508125 1423 ntBASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSMEM1Q8WWF3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 AC092803.2-201ENST00000564287 1899 ntBASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 AC142472.1-201ENST00000612013 1741 ntBASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SSMEM1Q8WWF3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SSMEM1Q8WWF3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSMEM1Q8WWF3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSMEM1Q8WWF3 AL035685.1-201ENST00000636663 812 ntBASIC19.53■□□□□ 0.72
SSMEM1Q8WWF3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSMEM1Q8WWF3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SSMEM1Q8WWF3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms