Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 HNRNPD-207ENST00000509107 583 ntTSL 522.88■■□□□ 1.252e-13■■□□□ 11.9
EIF3DO15371 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.572e-13■■□□□ 11.9
EIF3DO15371 HNRNPD-212ENST00000515432 545 ntTSL 57.19□□□□□ -1.262e-13■■□□□ 11.9
EIF3DO15371 TMEM70-207ENST00000523794 761 ntTSL 323.66■■□□□ 1.386e-6■■□□□ 11.9
EIF3DO15371 TMEM70-204ENST00000517614 539 ntTSL 223.09■■□□□ 1.296e-6■■□□□ 11.9
EIF3DO15371 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.09■■□□□ 1.296e-6■■□□□ 11.9
EIF3DO15371 CEP350-210ENST00000491495 1059 ntTSL 521.3■■□□□ 16e-6■■□□□ 11.9
EIF3DO15371 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 16e-6■■□□□ 11.9
EIF3DO15371 TMEM70-202ENST00000416961 928 ntTSL 221.19■□□□□ 0.986e-6■■□□□ 11.9
EIF3DO15371 HSPA9-206ENST00000506477 664 ntTSL 218.34■□□□□ 0.536e-6■■□□□ 11.9
EIF3DO15371 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.466e-6■■□□□ 11.9
EIF3DO15371 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.436e-6■■□□□ 11.9
EIF3DO15371 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.426e-6■■□□□ 11.9
EIF3DO15371 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.356e-6■■□□□ 11.9
EIF3DO15371 SRRT-209ENST00000474896 726 ntTSL 316.61■□□□□ 0.256e-6■■□□□ 11.9
EIF3DO15371 HSPA9-205ENST00000505110 518 ntTSL 416.26■□□□□ 0.196e-6■■□□□ 11.9
EIF3DO15371 HSPA9-204ENST00000504902 887 ntTSL 515.95■□□□□ 0.146e-6■■□□□ 11.9
EIF3DO15371 SRRT-201ENST00000423692 727 ntTSL 515.85■□□□□ 0.136e-6■■□□□ 11.9
EIF3DO15371 SRRT-219ENST00000641476 992 nt15.7■□□□□ 0.16e-6■■□□□ 11.9
EIF3DO15371 HSPA9-207ENST00000507097 1796 ntTSL 215.2■□□□□ 0.026e-6■■□□□ 11.9
EIF3DO15371 HERC2-206ENST00000564519 323 ntTSL 313.7□□□□□ -0.226e-6■■□□□ 11.9
EIF3DO15371 TMEM70-206ENST00000520167 479 ntTSL 213.27□□□□□ -0.296e-6■■□□□ 11.9
EIF3DO15371 HECTD4-214ENST00000552437 458 ntTSL 312.39□□□□□ -0.436e-6■■□□□ 11.9
EIF3DO15371 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.546e-6■■□□□ 11.9
EIF3DO15371 HECTD4-213ENST00000550968 2313 ntTSL 211.65□□□□□ -0.546e-6■■□□□ 11.9
EIF3DO15371 POLR2A-209ENST00000617998 6751 ntTSL 1 (best)11.62□□□□□ -0.556e-6■■□□□ 11.9
EIF3DO15371 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.596e-6■■□□□ 11.9
EIF3DO15371 HSPA9-208ENST00000507115 663 ntTSL 310.74□□□□□ -0.696e-6■■□□□ 11.9
EIF3DO15371 HSPA9-209ENST00000507886 551 ntTSL 310.52□□□□□ -0.736e-6■■□□□ 11.9
EIF3DO15371 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.826e-6■■□□□ 11.9
EIF3DO15371 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.116e-6■■□□□ 11.9
EIF3DO15371 HSPA9-203ENST00000504810 584 ntTSL 37.01□□□□□ -1.296e-6■■□□□ 11.9
EIF3DO15371 UBR4-206ENST00000419533 5583 ntTSL 58.93□□□□□ -0.987e-8■■□□□ 11.9
EIF3DO15371 AC138969.1-202ENST00000536260 2519 ntTSL 219.26■□□□□ 0.676e-10■■□□□ 11.9
EIF3DO15371 ATP1B3-205ENST00000475483 734 ntTSL 315.86■□□□□ 0.133e-11■■□□□ 11.8
EIF3DO15371 ATP1B3-204ENST00000466678 1708 ntTSL 315.46■□□□□ 0.073e-11■■□□□ 11.8
EIF3DO15371 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 03e-11■■□□□ 11.8
EIF3DO15371 ATP1B3-203ENST00000465172 1951 ntTSL 26.93□□□□□ -1.33e-11■■□□□ 11.8
EIF3DO15371 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.967e-7■■□□□ 11.8
EIF3DO15371 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.96■■□□□ 1.112e-11■■□□□ 11.8
EIF3DO15371 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.412e-11■■□□□ 11.8
EIF3DO15371 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.472e-11■■□□□ 11.8
EIF3DO15371 GOLGA4-207ENST00000437131 6947 ntTSL 1 (best)2.75□□□□□ -1.972e-11■■□□□ 11.8
EIF3DO15371 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC11.01□□□□□ -0.651e-7■■□□□ 11.8
EIF3DO15371 RANBP1-204ENST00000416427 645 ntTSL 526.93■■□□□ 1.93e-8■■□□□ 11.8
EIF3DO15371 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.01■■□□□ 1.753e-8■■□□□ 11.8
EIF3DO15371 PRRC2B-205ENST00000451855 1762 ntTSL 523.7■■□□□ 1.393e-8■■□□□ 11.8
EIF3DO15371 ICE1-202ENST00000505464 1074 ntTSL 222.81■■□□□ 1.243e-8■■□□□ 11.8
EIF3DO15371 PKD1P6-201ENST00000343738 4769 ntBASIC22.47■■□□□ 1.198e-7■■□□□ 11.8
EIF3DO15371 RANBP1-207ENST00000423859 832 ntTSL 319.92■□□□□ 0.783e-8■■□□□ 11.8
EIF3DO15371 RANBP1-205ENST00000418705 932 ntTSL 317.91■□□□□ 0.463e-8■■□□□ 11.8
EIF3DO15371 RANBP1-206ENST00000421656 333 ntTSL 316.97■□□□□ 0.313e-8■■□□□ 11.8
EIF3DO15371 IPO4-218ENST00000561199 3249 ntTSL 213.07□□□□□ -0.328e-7■■□□□ 11.8
EIF3DO15371 IPO4-207ENST00000558780 3540 ntTSL 212.85□□□□□ -0.358e-7■■□□□ 11.8
EIF3DO15371 IPO4-203ENST00000558046 3440 ntTSL 212.78□□□□□ -0.368e-7■■□□□ 11.8
EIF3DO15371 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.373e-8■■□□□ 11.8
EIF3DO15371 IPO4-211ENST00000560155 3485 ntTSL 1 (best)12.75□□□□□ -0.378e-7■■□□□ 11.8
EIF3DO15371 IPO4-214ENST00000560798 3581 ntTSL 212.37□□□□□ -0.438e-7■■□□□ 11.8
EIF3DO15371 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.478e-7■■□□□ 11.8
EIF3DO15371 IPO4-217ENST00000561090 3632 ntTSL 212.12□□□□□ -0.478e-7■■□□□ 11.8
EIF3DO15371 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.573e-8■■□□□ 11.8
EIF3DO15371 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.588e-7■■□□□ 11.8
EIF3DO15371 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC11.27□□□□□ -0.613e-8■■□□□ 11.8
EIF3DO15371 IPO4-209ENST00000559588 3537 ntTSL 1 (best)10.91□□□□□ -0.668e-7■■□□□ 11.8
EIF3DO15371 ICE1-203ENST00000512608 613 ntAPPRIS ALT2 TSL 43.41□□□□□ -1.863e-8■■□□□ 11.8
EIF3DO15371 PRPF4B-206ENST00000481109 2364 ntTSL 1 (best)10.03□□□□□ -0.84e-11■■□□□ 11.7
EIF3DO15371 PRPF4B-203ENST00000463634 2590 ntTSL 58.88□□□□□ -0.994e-11■■□□□ 11.7
EIF3DO15371 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.143e-6■■□□□ 11.7
EIF3DO15371 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.083e-6■■□□□ 11.7
EIF3DO15371 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.48□□□□□ -0.253e-6■■□□□ 11.7
EIF3DO15371 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.63e-9■■□□□ 11.7
EIF3DO15371 ANXA5-206ENST00000511552 1036 ntTSL 323.98■■□□□ 1.433e-9■■□□□ 11.7
EIF3DO15371 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.21■□□□□ 0.023e-9■■□□□ 11.7
EIF3DO15371 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.13■□□□□ 0.013e-9■■□□□ 11.7
EIF3DO15371 ANXA5-207ENST00000513428 868 ntTSL 214.74□□□□□ -0.053e-9■■□□□ 11.7
EIF3DO15371 ANXA5-209ENST00000513728 447 ntTSL 314.74□□□□□ -0.053e-9■■□□□ 11.7
EIF3DO15371 ANXA5-208ENST00000513523 582 ntTSL 313.8□□□□□ -0.23e-9■■□□□ 11.7
EIF3DO15371 ANXA5-203ENST00000506395 1606 ntTSL 513.4□□□□□ -0.263e-9■■□□□ 11.7
EIF3DO15371 ANXA5-204ENST00000509016 556 ntTSL 49.52□□□□□ -0.893e-9■■□□□ 11.7
EIF3DO15371 HIST1H2BB-201ENST00000615966 381 ntAPPRIS P1 BASIC11.33□□□□□ -0.65e-23■■□□□ 11.7
EIF3DO15371 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.13■■■■□ 3.052e-8■■□□□ 11.7
EIF3DO15371 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.962e-8■■□□□ 11.7
EIF3DO15371 ORC2-201ENST00000234296 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.682e-8■■□□□ 11.7
EIF3DO15371 PPP2CB-207ENST00000520500 603 ntTSL 46.47□□□□□ -1.372e-8■■□□□ 11.7
EIF3DO15371 PPP2CB-202ENST00000518243 577 ntTSL 34.93□□□□□ -1.622e-8■■□□□ 11.7
EIF3DO15371 ORC2-206ENST00000474877 551 ntTSL 43.09□□□□□ -1.912e-8■■□□□ 11.7
EIF3DO15371 FRAS1-204ENST00000508909 2297 ntTSL 217.38■□□□□ 0.377e-8■■□□□ 11.7
EIF3DO15371 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.628e-7■■□□□ 11.7
EIF3DO15371 VCP-203ENST00000448530 950 ntTSL 521.24■□□□□ 0.992e-15■■□□□ 11.6
EIF3DO15371 VCP-207ENST00000493886 2942 ntTSL 215.1■□□□□ 0.012e-15■■□□□ 11.6
EIF3DO15371 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.092e-15■■□□□ 11.6
EIF3DO15371 BPTF-213ENST00000580465 1951 ntTSL 26.33□□□□□ -1.42e-6■■□□□ 11.6
EIF3DO15371 BPTF-209ENST00000577770 475 ntTSL 35.27□□□□□ -1.572e-6■■□□□ 11.6
EIF3DO15371 BPTF-204ENST00000342579 4041 ntAPPRIS ALT2 TSL 1 (best)4.5□□□□□ -1.692e-6■■□□□ 11.6
EIF3DO15371 BPTF-218ENST00000584931 571 ntTSL 33.45□□□□□ -1.862e-6■■□□□ 11.6
EIF3DO15371 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.722e-6■■□□□ 11.6
EIF3DO15371 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.042e-6■■□□□ 11.6
EIF3DO15371 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.12e-6■■□□□ 11.6
EIF3DO15371 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.187e-7■■□□□ 11.6
EIF3DO15371 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.242e-24■■□□□ 11.6
Retrieved 100 of 4,069 protein–RNA pairs in 277.7 ms