RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-204ENST00000508909 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
FRAS1-204ENST00000508909 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
FRAS1-204ENST00000508909 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.05
FRAS1-204ENST00000508909 CCDC180Q9P1Z9 1646 aa27.77■■■□□ 2.04
FRAS1-204ENST00000508909 SUPT5HO00267 1087 aaKnown RBP27.7■■■□□ 2.03
FRAS1-204ENST00000508909 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.95
FRAS1-204ENST00000508909 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
FRAS1-204ENST00000508909 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
FRAS1-204ENST00000508909 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
FRAS1-204ENST00000508909 HRCP23327 699 aa26.48■■□□□ 1.83
FRAS1-204ENST00000508909 PCGF6Q9BYE7 350 aa26.36■■□□□ 1.81
FRAS1-204ENST00000508909 LOC105371045A0A1W2PR82 267 aa26.3■■□□□ 1.8
FRAS1-204ENST00000508909 ABCC9O60706 1549 aa26.25■■□□□ 1.79
FRAS1-204ENST00000508909 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
FRAS1-204ENST00000508909 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
FRAS1-204ENST00000508909 PPARGC1BQ86YN6 1023 aaKnown RBP25.95■■□□□ 1.74
FRAS1-204ENST00000508909 RB1CC1Q8TDY2 1594 aa25.81■■□□□ 1.72
FRAS1-204ENST00000508909 TRIM26Q12899 539 aaPredicted RBP25.8■■□□□ 1.72
FRAS1-204ENST00000508909 TRIM41Q8WV44 630 aa25.77■■□□□ 1.72
FRAS1-204ENST00000508909 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
FRAS1-204ENST00000508909 NACADO15069 1562 aa25.68■■□□□ 1.7
FRAS1-204ENST00000508909 MROH2BQ7Z745 1585 aa25.59■■□□□ 1.69
FRAS1-204ENST00000508909 FAM9AQ8IZU1 332 aaPredicted RBP25.59■■□□□ 1.69
FRAS1-204ENST00000508909 WIZO95785 1651 aa25.43■■□□□ 1.66
FRAS1-204ENST00000508909 EHMT2Q96KQ7 1210 aa25.36■■□□□ 1.65
FRAS1-204ENST00000508909 ZEB1P37275 1124 aaPredicted RBP25.25■■□□□ 1.63
FRAS1-204ENST00000508909 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
FRAS1-204ENST00000508909 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
FRAS1-204ENST00000508909 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
FRAS1-204ENST00000508909 CCDC88BA6NC98 1476 aa24.97■■□□□ 1.59
FRAS1-204ENST00000508909 SMARCA4P51532 1647 aa24.97■■□□□ 1.59
FRAS1-204ENST00000508909 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
FRAS1-204ENST00000508909 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
FRAS1-204ENST00000508909 UNC13AQ9UPW8 1703 aa24.86■■□□□ 1.57
FRAS1-204ENST00000508909 SOGA1O94964 1423 aa24.78■■□□□ 1.56
FRAS1-204ENST00000508909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
FRAS1-204ENST00000508909 WRNQ14191 1432 aaPredicted RBP eCLIP24.73■■□□□ 1.55
FRAS1-204ENST00000508909 CEP162Q5TB80 1403 aa24.69■■□□□ 1.54
FRAS1-204ENST00000508909 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
FRAS1-204ENST00000508909 TNIKQ9UKE5 1360 aa24.66■■□□□ 1.54
FRAS1-204ENST00000508909 CCER1Q8TC90 406 aaPredicted RBP24.65■■□□□ 1.54
FRAS1-204ENST00000508909 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
FRAS1-204ENST00000508909 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
FRAS1-204ENST00000508909 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
FRAS1-204ENST00000508909 EEA1Q15075 1411 aa24.59■■□□□ 1.53
FRAS1-204ENST00000508909 TTBK1Q5TCY1 1321 aaPredicted RBP24.57■■□□□ 1.52
FRAS1-204ENST00000508909 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
FRAS1-204ENST00000508909 UBTFP17480 764 aaKnown RBP24.51■■□□□ 1.51
FRAS1-204ENST00000508909 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
FRAS1-204ENST00000508909 GOLGA3Q08378 1498 aa24.44■■□□□ 1.5
FRAS1-204ENST00000508909 SYNJ1O43426 1573 aa24.36■■□□□ 1.49
FRAS1-204ENST00000508909 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
FRAS1-204ENST00000508909 CEP164Q9UPV0 1460 aa24.29■■□□□ 1.48
FRAS1-204ENST00000508909 DIEXFQ68CQ4 756 aaKnown RBP24.28■■□□□ 1.48
FRAS1-204ENST00000508909 KIF21BO75037 1637 aa24.25■■□□□ 1.47
FRAS1-204ENST00000508909 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
FRAS1-204ENST00000508909 ACIN1Q9UKV3 1341 aaKnown RBP24.21■■□□□ 1.47
FRAS1-204ENST00000508909 CLIP1P30622 1438 aa24.19■■□□□ 1.46
FRAS1-204ENST00000508909 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
FRAS1-204ENST00000508909 RAPGEF2Q9Y4G8 1499 aa24.14■■□□□ 1.45
FRAS1-204ENST00000508909 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
FRAS1-204ENST00000508909 HNRNPUL2Q1KMD3 747 aaKnown RBP24.09■■□□□ 1.45
FRAS1-204ENST00000508909 ZNF316A6NFI3 1004 aaPredicted RBP24.08■■□□□ 1.44
FRAS1-204ENST00000508909 PELP1Q8IZL8 1130 aaKnown RBP24.04■■□□□ 1.44
FRAS1-204ENST00000508909 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
FRAS1-204ENST00000508909 RANGAP1P46060 587 aaPredicted RBP23.99■■□□□ 1.43
FRAS1-204ENST00000508909 CENPBP07199 599 aaPredicted RBP23.95■■□□□ 1.42
FRAS1-204ENST00000508909 APLP2Q06481 763 aa23.94■■□□□ 1.42
FRAS1-204ENST00000508909 GTF3C3Q9Y5Q9 886 aa23.93■■□□□ 1.42
FRAS1-204ENST00000508909 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
FRAS1-204ENST00000508909 PRXQ9BXM0 1461 aa23.89■■□□□ 1.42
FRAS1-204ENST00000508909 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
FRAS1-204ENST00000508909 NCAPD3P42695 1498 aa23.83■■□□□ 1.41
FRAS1-204ENST00000508909 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
FRAS1-204ENST00000508909 CUX1P39880 1505 aa23.8■■□□□ 1.4
FRAS1-204ENST00000508909 MIER1Q8N108 512 aa23.79■■□□□ 1.4
FRAS1-204ENST00000508909 HMGXB3Q12766 1538 aa23.77■■□□□ 1.4
FRAS1-204ENST00000508909 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
FRAS1-204ENST00000508909 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
FRAS1-204ENST00000508909 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
FRAS1-204ENST00000508909 CFTRP13569 1480 aa23.68■■□□□ 1.38
FRAS1-204ENST00000508909 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
FRAS1-204ENST00000508909 CLSPNQ9HAW4 1339 aa23.63■■□□□ 1.37
FRAS1-204ENST00000508909 RRBP1Q9P2E9 1410 aaKnown RBP23.6■■□□□ 1.37
FRAS1-204ENST00000508909 ARHGAP35Q9NRY4 1499 aa23.58■■□□□ 1.37
FRAS1-204ENST00000508909 IGF1RP08069 1367 aa23.51■■□□□ 1.35
FRAS1-204ENST00000508909 CUX2O14529 1486 aa23.48■■□□□ 1.35
FRAS1-204ENST00000508909 CCNB3Q8WWL7 1395 aa23.47■■□□□ 1.35
FRAS1-204ENST00000508909 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.33
FRAS1-204ENST00000508909 ITGAEP38570 1179 aa23.37■■□□□ 1.33
FRAS1-204ENST00000508909 PRDM2Q13029 1718 aa23.37■■□□□ 1.33
FRAS1-204ENST00000508909 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
FRAS1-204ENST00000508909 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.32
FRAS1-204ENST00000508909 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
FRAS1-204ENST00000508909 TIAM1Q13009 1591 aa23.31■■□□□ 1.32
FRAS1-204ENST00000508909 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
FRAS1-204ENST00000508909 LRRC9Q6ZRR7 1453 aa23.25■■□□□ 1.31
FRAS1-204ENST00000508909 MAPKBP1O60336 1514 aa23.25■■□□□ 1.31
FRAS1-204ENST00000508909 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
FRAS1-204ENST00000508909 SETD5Q9C0A6 1442 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms