RNA–Protein interactions for RNA: ENST00000463634.6

PRPF4B-203, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 2,590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-203ENST00000463634 NISCHQ9Y2I1 1504 aa17.54■□□□□ 0.4
PRPF4B-203ENST00000463634 CCDC180Q9P1Z9 1646 aa15.07■□□□□ 0
PRPF4B-203ENST00000463634 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
PRPF4B-203ENST00000463634 SHROOM4Q9ULL8 1493 aa14.71□□□□□ -0.05
PRPF4B-203ENST00000463634 DCAF8L2P0C7V8 631 aa14.56□□□□□ -0.08
PRPF4B-203ENST00000463634 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
PRPF4B-203ENST00000463634 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
PRPF4B-203ENST00000463634 ABCC9O60706 1549 aa14.15□□□□□ -0.14
PRPF4B-203ENST00000463634 MYO15BQ96JP2 1530 aa14.1□□□□□ -0.15
PRPF4B-203ENST00000463634 SCRIBQ14160 1630 aa14.06□□□□□ -0.16
PRPF4B-203ENST00000463634 NACADO15069 1562 aa13.98□□□□□ -0.17
PRPF4B-203ENST00000463634 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
PRPF4B-203ENST00000463634 CHIC1Q5VXU3 224 aa13.77□□□□□ -0.21
PRPF4B-203ENST00000463634 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
PRPF4B-203ENST00000463634 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
PRPF4B-203ENST00000463634 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
PRPF4B-203ENST00000463634 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
PRPF4B-203ENST00000463634 WIZO95785 1651 aa13.53□□□□□ -0.24
PRPF4B-203ENST00000463634 BAZ1AQ9NRL2 1556 aaPredicted RBP13.5□□□□□ -0.25
PRPF4B-203ENST00000463634 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRPF4B-203ENST00000463634 BICRAQ9NZM4 1560 aa13.45□□□□□ -0.26
PRPF4B-203ENST00000463634 SMARCA4P51532 1647 aa13.42□□□□□ -0.26
PRPF4B-203ENST00000463634 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
PRPF4B-203ENST00000463634 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
PRPF4B-203ENST00000463634 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
PRPF4B-203ENST00000463634 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
PRPF4B-203ENST00000463634 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
PRPF4B-203ENST00000463634 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
PRPF4B-203ENST00000463634 FAM9AQ8IZU1 332 aaPredicted RBP13.21□□□□□ -0.3
PRPF4B-203ENST00000463634 PEG3Q9GZU2 1588 aa13.19□□□□□ -0.3
PRPF4B-203ENST00000463634 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
PRPF4B-203ENST00000463634 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
PRPF4B-203ENST00000463634 EHMT2Q96KQ7 1210 aa13.09□□□□□ -0.31
PRPF4B-203ENST00000463634 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.31
PRPF4B-203ENST00000463634 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
PRPF4B-203ENST00000463634 SOGA1O94964 1423 aa12.94□□□□□ -0.34
PRPF4B-203ENST00000463634 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
PRPF4B-203ENST00000463634 NCAPD3P42695 1498 aa12.93□□□□□ -0.34
PRPF4B-203ENST00000463634 HMGXB3Q12766 1538 aa12.92□□□□□ -0.34
PRPF4B-203ENST00000463634 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
PRPF4B-203ENST00000463634 RUSC2Q8N2Y8 1516 aa12.9□□□□□ -0.35
PRPF4B-203ENST00000463634 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
PRPF4B-203ENST00000463634 HRCP23327 699 aa12.86□□□□□ -0.35
PRPF4B-203ENST00000463634 EEA1Q15075 1411 aa12.83□□□□□ -0.36
PRPF4B-203ENST00000463634 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
PRPF4B-203ENST00000463634 TOP2BQ02880 1626 aa12.77□□□□□ -0.37
PRPF4B-203ENST00000463634 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
PRPF4B-203ENST00000463634 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
PRPF4B-203ENST00000463634 CFTRP13569 1480 aa12.75□□□□□ -0.37
PRPF4B-203ENST00000463634 PPARGC1BQ86YN6 1023 aaKnown RBP12.75□□□□□ -0.37
PRPF4B-203ENST00000463634 TNIKQ9UKE5 1360 aa12.75□□□□□ -0.37
PRPF4B-203ENST00000463634 UBTFP17480 764 aaKnown RBP12.74□□□□□ -0.37
PRPF4B-203ENST00000463634 GOLGA3Q08378 1498 aa12.73□□□□□ -0.37
PRPF4B-203ENST00000463634 BIVM-ERCC5R4GMW8 1640 aa12.73□□□□□ -0.37
PRPF4B-203ENST00000463634 CUX1P39880 1505 aa12.7□□□□□ -0.38
PRPF4B-203ENST00000463634 CEP164Q9UPV0 1460 aa12.69□□□□□ -0.38
PRPF4B-203ENST00000463634 KIF21BO75037 1637 aa12.69□□□□□ -0.38
PRPF4B-203ENST00000463634 PRDM2Q13029 1718 aa12.65□□□□□ -0.38
PRPF4B-203ENST00000463634 CADPSQ9ULU8 1353 aa12.65□□□□□ -0.38
PRPF4B-203ENST00000463634 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
PRPF4B-203ENST00000463634 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
PRPF4B-203ENST00000463634 CLIP1P30622 1438 aa12.57□□□□□ -0.4
PRPF4B-203ENST00000463634 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
PRPF4B-203ENST00000463634 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
PRPF4B-203ENST00000463634 RANGAP1P46060 587 aaPredicted RBP12.56□□□□□ -0.4
PRPF4B-203ENST00000463634 NESP48681 1621 aa12.53□□□□□ -0.4
PRPF4B-203ENST00000463634 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
PRPF4B-203ENST00000463634 ERICH3Q5RHP9 1530 aa12.53□□□□□ -0.4
PRPF4B-203ENST00000463634 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
PRPF4B-203ENST00000463634 CUX2O14529 1486 aa12.5□□□□□ -0.41
PRPF4B-203ENST00000463634 DNAJC5BQ9UF47 199 aa12.49□□□□□ -0.41
PRPF4B-203ENST00000463634 VPS8Q8N3P4 1428 aa12.48□□□□□ -0.41
PRPF4B-203ENST00000463634 ZEB1P37275 1124 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-203ENST00000463634 IGF1RP08069 1367 aa12.44□□□□□ -0.42
PRPF4B-203ENST00000463634 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
PRPF4B-203ENST00000463634 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
PRPF4B-203ENST00000463634 LAMC3Q9Y6N6 1575 aa12.43□□□□□ -0.42
PRPF4B-203ENST00000463634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.42□□□□□ -0.42
PRPF4B-203ENST00000463634 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
PRPF4B-203ENST00000463634 RAD54L2Q9Y4B4 1467 aa12.41□□□□□ -0.42
PRPF4B-203ENST00000463634 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.42
PRPF4B-203ENST00000463634 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
PRPF4B-203ENST00000463634 APLP2Q06481 763 aa12.38□□□□□ -0.43
PRPF4B-203ENST00000463634 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
PRPF4B-203ENST00000463634 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
PRPF4B-203ENST00000463634 ABCA10Q8WWZ4 1543 aa12.36□□□□□ -0.43
PRPF4B-203ENST00000463634 CCER1Q8TC90 406 aaPredicted RBP12.36□□□□□ -0.43
PRPF4B-203ENST00000463634 ARHGAP35Q9NRY4 1499 aa12.35□□□□□ -0.43
PRPF4B-203ENST00000463634 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
PRPF4B-203ENST00000463634 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
PRPF4B-203ENST00000463634 WDR97A6NE52 1622 aa12.29□□□□□ -0.44
PRPF4B-203ENST00000463634 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
PRPF4B-203ENST00000463634 KANK4Q5T7N3 995 aaPredicted RBP12.28□□□□□ -0.44
PRPF4B-203ENST00000463634 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.44
PRPF4B-203ENST00000463634 CUL7Q14999 1698 aa12.26□□□□□ -0.45
PRPF4B-203ENST00000463634 ABCA5Q8WWZ7 1642 aa12.25□□□□□ -0.45
PRPF4B-203ENST00000463634 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
PRPF4B-203ENST00000463634 GAPVD1Q14C86 1478 aa12.22□□□□□ -0.45
PRPF4B-203ENST00000463634 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
PRPF4B-203ENST00000463634 CTTNBP2Q8WZ74 1663 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms