RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
SUPT16H-201ENST00000216297 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
SUPT16H-201ENST00000216297 HRCP23327 699 aa14.6□□□□□ -0.07
SUPT16H-201ENST00000216297 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
SUPT16H-201ENST00000216297 PPARGC1BQ86YN6 1023 aaKnown RBP14.44□□□□□ -0.1
SUPT16H-201ENST00000216297 SUPT5HO00267 1087 aaKnown RBP14.35□□□□□ -0.11
SUPT16H-201ENST00000216297 MYT1Q01538 1121 aa14.23□□□□□ -0.13
SUPT16H-201ENST00000216297 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
SUPT16H-201ENST00000216297 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
SUPT16H-201ENST00000216297 ZEB1P37275 1124 aaPredicted RBP13.82□□□□□ -0.2
SUPT16H-201ENST00000216297 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
SUPT16H-201ENST00000216297 TRIM26Q12899 539 aaPredicted RBP13.76□□□□□ -0.21
SUPT16H-201ENST00000216297 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
SUPT16H-201ENST00000216297 LOC105371045A0A1W2PR82 267 aa13.68□□□□□ -0.22
SUPT16H-201ENST00000216297 GTF3C3Q9Y5Q9 886 aa13.68□□□□□ -0.22
SUPT16H-201ENST00000216297 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
SUPT16H-201ENST00000216297 MYO15BQ96JP2 1530 aa13.58□□□□□ -0.24
SUPT16H-201ENST00000216297 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
SUPT16H-201ENST00000216297 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
SUPT16H-201ENST00000216297 DCAF8L2P0C7V8 631 aa13.55□□□□□ -0.24
SUPT16H-201ENST00000216297 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
SUPT16H-201ENST00000216297 CCER1Q8TC90 406 aaPredicted RBP13.45□□□□□ -0.26
SUPT16H-201ENST00000216297 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
SUPT16H-201ENST00000216297 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
SUPT16H-201ENST00000216297 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
SUPT16H-201ENST00000216297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
SUPT16H-201ENST00000216297 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
SUPT16H-201ENST00000216297 BCL11AQ9H165 835 aa13.2□□□□□ -0.3
SUPT16H-201ENST00000216297 CCDC180Q9P1Z9 1646 aa13.17□□□□□ -0.3
SUPT16H-201ENST00000216297 TRIM41Q8WV44 630 aa13.13□□□□□ -0.31
SUPT16H-201ENST00000216297 ANP32EQ9BTT0 268 aa13.03□□□□□ -0.32
SUPT16H-201ENST00000216297 ZNF316A6NFI3 1004 aaPredicted RBP13□□□□□ -0.33
SUPT16H-201ENST00000216297 ERICH6Q7L0X2 663 aa12.95□□□□□ -0.34
SUPT16H-201ENST00000216297 MIER1Q8N108 512 aa12.93□□□□□ -0.34
SUPT16H-201ENST00000216297 BCANQ96GW7 911 aa12.9□□□□□ -0.34
SUPT16H-201ENST00000216297 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
SUPT16H-201ENST00000216297 SUPT16HQ9Y5B9 1047 aaKnown RBP12.79□□□□□ -0.36
SUPT16H-201ENST00000216297 NEFLP07196 543 aa12.78□□□□□ -0.36
SUPT16H-201ENST00000216297 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.36
SUPT16H-201ENST00000216297 HNRNPUL2Q1KMD3 747 aaKnown RBP12.75□□□□□ -0.37
SUPT16H-201ENST00000216297 PRKCSHP14314 528 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-201ENST00000216297 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
SUPT16H-201ENST00000216297 FKBP8Q14318 412 aa12.65□□□□□ -0.38
SUPT16H-201ENST00000216297 APLP2Q06481 763 aa12.61□□□□□ -0.39
SUPT16H-201ENST00000216297 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-201ENST00000216297 ITGAEP38570 1179 aa12.58□□□□□ -0.4
SUPT16H-201ENST00000216297 ZCCHC6Q5VYS8 1495 aaKnown RBP12.57□□□□□ -0.4
SUPT16H-201ENST00000216297 RBM19Q9Y4C8 960 aaKnown RBP12.55□□□□□ -0.4
SUPT16H-201ENST00000216297 RANGAP1P46060 587 aaPredicted RBP12.51□□□□□ -0.41
SUPT16H-201ENST00000216297 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
SUPT16H-201ENST00000216297 NBR1Q14596 966 aa12.44□□□□□ -0.42
SUPT16H-201ENST00000216297 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
SUPT16H-201ENST00000216297 RTL5Q5HYW3 569 aaPredicted RBP12.42□□□□□ -0.42
SUPT16H-201ENST00000216297 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.42
SUPT16H-201ENST00000216297 TRIM52Q96A61 297 aa12.39□□□□□ -0.43
SUPT16H-201ENST00000216297 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
SUPT16H-201ENST00000216297 RTN4Q9NQC3 1192 aaKnown RBP12.35□□□□□ -0.43
SUPT16H-201ENST00000216297 IRX6P78412 446 aaPredicted RBP12.34□□□□□ -0.43
SUPT16H-201ENST00000216297 CCDC136Q96JN2 1154 aa12.34□□□□□ -0.43
SUPT16H-201ENST00000216297 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
SUPT16H-201ENST00000216297 KCNH8Q96L42 1107 aa12.32□□□□□ -0.44
SUPT16H-201ENST00000216297 DDX10Q13206 875 aaKnown RBP12.31□□□□□ -0.44
SUPT16H-201ENST00000216297 MSH5O43196 834 aa12.27□□□□□ -0.44
SUPT16H-201ENST00000216297 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.44
SUPT16H-201ENST00000216297 ANP32CO43423 234 aa12.25□□□□□ -0.45
SUPT16H-201ENST00000216297 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-201ENST00000216297 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
SUPT16H-201ENST00000216297 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
SUPT16H-201ENST00000216297 HNRNPUQ00839 825 aaKnown RBP eCLIP12.17□□□□□ -0.46
SUPT16H-201ENST00000216297 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
SUPT16H-201ENST00000216297 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-201ENST00000216297 NOP58Q9Y2X3 529 aaKnown RBP12.17□□□□□ -0.46
SUPT16H-201ENST00000216297 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
SUPT16H-201ENST00000216297 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
SUPT16H-201ENST00000216297 ERICH6BQ5W0A0 696 aa12.12□□□□□ -0.47
SUPT16H-201ENST00000216297 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
SUPT16H-201ENST00000216297 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
SUPT16H-201ENST00000216297 IL27Q8NEV9 243 aa12.08□□□□□ -0.48
SUPT16H-201ENST00000216297 B4GALNT3Q6L9W6 998 aa12.08□□□□□ -0.48
SUPT16H-201ENST00000216297 WRNQ14191 1432 aaPredicted RBP eCLIP12.07□□□□□ -0.48
SUPT16H-201ENST00000216297 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
SUPT16H-201ENST00000216297 CNGB1Q14028 1251 aaPredicted RBP12.05□□□□□ -0.48
SUPT16H-201ENST00000216297 PPP4R2Q9NY27 417 aa12.04□□□□□ -0.48
SUPT16H-201ENST00000216297 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
SUPT16H-201ENST00000216297 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
SUPT16H-201ENST00000216297 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
SUPT16H-201ENST00000216297 NEFMP07197 916 aa11.99□□□□□ -0.49
SUPT16H-201ENST00000216297 FAM9BQ8IZU0 186 aa11.97□□□□□ -0.49
SUPT16H-201ENST00000216297 DHX57Q6P158 1386 aaKnown RBP11.97□□□□□ -0.49
SUPT16H-201ENST00000216297 CCER2I3L3R5 266 aa11.96□□□□□ -0.5
SUPT16H-201ENST00000216297 ATP1B4Q9UN42 357 aaPredicted RBP11.96□□□□□ -0.5
SUPT16H-201ENST00000216297 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
SUPT16H-201ENST00000216297 ABCC9O60706 1549 aa11.95□□□□□ -0.5
SUPT16H-201ENST00000216297 GLIPR1L2Q4G1C9 344 aa11.95□□□□□ -0.5
SUPT16H-201ENST00000216297 CLIP1P30622 1438 aa11.94□□□□□ -0.5
SUPT16H-201ENST00000216297 SOGA1O94964 1423 aa11.94□□□□□ -0.5
SUPT16H-201ENST00000216297 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
SUPT16H-201ENST00000216297 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-201ENST00000216297 IPO9Q96P70 1041 aaKnown RBP11.92□□□□□ -0.5
SUPT16H-201ENST00000216297 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms