RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
PRPF4B-206ENST00000481109 MYT1Q01538 1121 aa18.59■□□□□ 0.57
PRPF4B-206ENST00000481109 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.46
PRPF4B-206ENST00000481109 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
PRPF4B-206ENST00000481109 HRCP23327 699 aa17.57■□□□□ 0.4
PRPF4B-206ENST00000481109 SCAF1Q9H7N4 1312 aaKnown RBP17.09■□□□□ 0.33
PRPF4B-206ENST00000481109 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
PRPF4B-206ENST00000481109 ERICH6Q7L0X2 663 aa16.91■□□□□ 0.3
PRPF4B-206ENST00000481109 APLP2Q06481 763 aa16.82■□□□□ 0.28
PRPF4B-206ENST00000481109 BCL11AQ9H165 835 aa16.8■□□□□ 0.28
PRPF4B-206ENST00000481109 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
PRPF4B-206ENST00000481109 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
PRPF4B-206ENST00000481109 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
PRPF4B-206ENST00000481109 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
PRPF4B-206ENST00000481109 PCGF6Q9BYE7 350 aa16.41■□□□□ 0.22
PRPF4B-206ENST00000481109 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
PRPF4B-206ENST00000481109 ZEB1P37275 1124 aaPredicted RBP16.31■□□□□ 0.2
PRPF4B-206ENST00000481109 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
PRPF4B-206ENST00000481109 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
PRPF4B-206ENST00000481109 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
PRPF4B-206ENST00000481109 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
PRPF4B-206ENST00000481109 DCAF1Q9Y4B6 1507 aa16.05■□□□□ 0.16
PRPF4B-206ENST00000481109 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
PRPF4B-206ENST00000481109 DAXXQ9UER7 740 aaPredicted RBP15.94■□□□□ 0.14
PRPF4B-206ENST00000481109 CSRNP3Q8WYN3 585 aa15.87■□□□□ 0.13
PRPF4B-206ENST00000481109 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
PRPF4B-206ENST00000481109 EIF5BO60841 1220 aaKnown RBP15.72■□□□□ 0.11
PRPF4B-206ENST00000481109 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
PRPF4B-206ENST00000481109 CLSPNQ9HAW4 1339 aa15.62■□□□□ 0.09
PRPF4B-206ENST00000481109 ANO8Q9HCE9 1232 aaPredicted RBP15.51■□□□□ 0.07
PRPF4B-206ENST00000481109 TSHZ2Q9NRE2 1034 aa15.5■□□□□ 0.07
PRPF4B-206ENST00000481109 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
PRPF4B-206ENST00000481109 SHROOM4Q9ULL8 1493 aa15.45■□□□□ 0.06
PRPF4B-206ENST00000481109 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
PRPF4B-206ENST00000481109 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
PRPF4B-206ENST00000481109 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
PRPF4B-206ENST00000481109 SUPT16HQ9Y5B9 1047 aaKnown RBP15.28■□□□□ 0.04
PRPF4B-206ENST00000481109 TRIM41Q8WV44 630 aa15.25■□□□□ 0.03
PRPF4B-206ENST00000481109 PKNOX2Q96KN3 472 aa15.24■□□□□ 0.03
PRPF4B-206ENST00000481109 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
PRPF4B-206ENST00000481109 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
PRPF4B-206ENST00000481109 SUPT5HO00267 1087 aaKnown RBP15.18■□□□□ 0.02
PRPF4B-206ENST00000481109 PODXL2Q9NZ53 605 aa15.16■□□□□ 0.02
PRPF4B-206ENST00000481109 YTHDC1Q96MU7 727 aaKnown RBP15.1■□□□□ 0.01
PRPF4B-206ENST00000481109 DEKP35659 375 aaKnown RBP15.06■□□□□ 0
PRPF4B-206ENST00000481109 ZCCHC6Q5VYS8 1495 aaKnown RBP15.05■□□□□ 0
PRPF4B-206ENST00000481109 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
PRPF4B-206ENST00000481109 CCDC136Q96JN2 1154 aa15.02■□□□□ -0
PRPF4B-206ENST00000481109 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
PRPF4B-206ENST00000481109 DCAF8L2P0C7V8 631 aa15.01□□□□□ -0.01
PRPF4B-206ENST00000481109 FANCIQ9NVI1 1328 aa14.97□□□□□ -0.01
PRPF4B-206ENST00000481109 LOC105371045A0A1W2PR82 267 aa14.97□□□□□ -0.01
PRPF4B-206ENST00000481109 MSH5O43196 834 aa14.97□□□□□ -0.01
PRPF4B-206ENST00000481109 MIER1Q8N108 512 aa14.92□□□□□ -0.02
PRPF4B-206ENST00000481109 CCER1Q8TC90 406 aaPredicted RBP14.91□□□□□ -0.02
PRPF4B-206ENST00000481109 NEFLP07196 543 aa14.87□□□□□ -0.03
PRPF4B-206ENST00000481109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
PRPF4B-206ENST00000481109 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.79□□□□□ -0.04
PRPF4B-206ENST00000481109 GLIPR1L2Q4G1C9 344 aa14.76□□□□□ -0.05
PRPF4B-206ENST00000481109 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
PRPF4B-206ENST00000481109 ZMYND15Q9H091 742 aa14.62□□□□□ -0.07
PRPF4B-206ENST00000481109 PDE4CQ08493 712 aa14.61□□□□□ -0.07
PRPF4B-206ENST00000481109 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
PRPF4B-206ENST00000481109 FGD1P98174 961 aa14.59□□□□□ -0.07
PRPF4B-206ENST00000481109 PDIA4P13667 645 aaKnown RBP14.58□□□□□ -0.08
PRPF4B-206ENST00000481109 RSPH6AQ9H0K4 717 aa14.58□□□□□ -0.08
PRPF4B-206ENST00000481109 NCBP3Q53F19 620 aaKnown RBP14.54□□□□□ -0.08
PRPF4B-206ENST00000481109 FKBP8Q14318 412 aa14.53□□□□□ -0.08
PRPF4B-206ENST00000481109 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.08
PRPF4B-206ENST00000481109 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
PRPF4B-206ENST00000481109 BCANQ96GW7 911 aa14.5□□□□□ -0.09
PRPF4B-206ENST00000481109 AAMPQ13685 434 aa14.49□□□□□ -0.09
PRPF4B-206ENST00000481109 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
PRPF4B-206ENST00000481109 RTL5Q5HYW3 569 aaPredicted RBP14.46□□□□□ -0.09
PRPF4B-206ENST00000481109 ARXQ96QS3 562 aa14.46□□□□□ -0.09
PRPF4B-206ENST00000481109 NOP58Q9Y2X3 529 aaKnown RBP14.46□□□□□ -0.09
PRPF4B-206ENST00000481109 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
PRPF4B-206ENST00000481109 WASHC2CQ9Y4E1 1318 aa14.42□□□□□ -0.1
PRPF4B-206ENST00000481109 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
PRPF4B-206ENST00000481109 RBM10P98175 930 aaKnown RBP14.41□□□□□ -0.1
PRPF4B-206ENST00000481109 NBR1Q14596 966 aa14.39□□□□□ -0.11
PRPF4B-206ENST00000481109 TAF7LQ5H9L4 462 aa14.36□□□□□ -0.11
PRPF4B-206ENST00000481109 A0A0U1RQG5 324 aaPredicted RBP14.34□□□□□ -0.11
PRPF4B-206ENST00000481109 KLHL34Q8N239 644 aa14.33□□□□□ -0.11
PRPF4B-206ENST00000481109 USP35Q9P2H5 1018 aa14.33□□□□□ -0.11
PRPF4B-206ENST00000481109 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
PRPF4B-206ENST00000481109 TIMELESSQ9UNS1 1208 aa14.32□□□□□ -0.12
PRPF4B-206ENST00000481109 ITGAEP38570 1179 aa14.31□□□□□ -0.12
PRPF4B-206ENST00000481109 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
PRPF4B-206ENST00000481109 FAM43AQ8N2R8 423 aa14.26□□□□□ -0.13
PRPF4B-206ENST00000481109 PAK3O75914 559 aaPredicted RBP14.25□□□□□ -0.13
PRPF4B-206ENST00000481109 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
PRPF4B-206ENST00000481109 ABCC9O60706 1549 aa14.19□□□□□ -0.14
PRPF4B-206ENST00000481109 RSF1Q96T23 1441 aaPredicted RBP14.18□□□□□ -0.14
PRPF4B-206ENST00000481109 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
PRPF4B-206ENST00000481109 BRPF3Q9ULD4 1205 aa14.17□□□□□ -0.14
PRPF4B-206ENST00000481109 HSP90AA2PQ14568 343 aaPredicted RBP14.16□□□□□ -0.14
PRPF4B-206ENST00000481109 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
PRPF4B-206ENST00000481109 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
PRPF4B-206ENST00000481109 NEFMP07197 916 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms