RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 NISCHQ9Y2I1 1504 aa36.78■■■■□ 3.48
SRRT-201ENST00000423692 CCDC180Q9P1Z9 1646 aa32.9■■■□□ 2.86
SRRT-201ENST00000423692 ABCC9O60706 1549 aa32.68■■■□□ 2.82
SRRT-201ENST00000423692 RB1CC1Q8TDY2 1594 aa31.23■■■□□ 2.59
SRRT-201ENST00000423692 NACADO15069 1562 aa31.09■■■□□ 2.57
SRRT-201ENST00000423692 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
SRRT-201ENST00000423692 MYO15BQ96JP2 1530 aa30.78■■■□□ 2.52
SRRT-201ENST00000423692 DNAJC5BQ9UF47 199 aa30.55■■■□□ 2.48
SRRT-201ENST00000423692 ZCCHC6Q5VYS8 1495 aaKnown RBP30.52■■■□□ 2.48
SRRT-201ENST00000423692 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
SRRT-201ENST00000423692 UNC13AQ9UPW8 1703 aa30.45■■■□□ 2.47
SRRT-201ENST00000423692 DCAF1Q9Y4B6 1507 aa30.45■■■□□ 2.47
SRRT-201ENST00000423692 BICRAQ9NZM4 1560 aa30.33■■■□□ 2.45
SRRT-201ENST00000423692 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.4
SRRT-201ENST00000423692 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
SRRT-201ENST00000423692 EIF4G1Q04637 1599 aaKnown RBP29.56■■■□□ 2.32
SRRT-201ENST00000423692 CC2D2AQ9P2K1 1620 aa29.55■■■□□ 2.32
SRRT-201ENST00000423692 CECR2Q9BXF3 1484 aa29.45■■■□□ 2.31
SRRT-201ENST00000423692 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
SRRT-201ENST00000423692 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.17
SRRT-201ENST00000423692 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
SRRT-201ENST00000423692 SMARCA2P51531 1590 aa28.55■■■□□ 2.16
SRRT-201ENST00000423692 BAZ1AQ9NRL2 1556 aaPredicted RBP28.52■■■□□ 2.16
SRRT-201ENST00000423692 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
SRRT-201ENST00000423692 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
SRRT-201ENST00000423692 BAZ1BQ9UIG0 1483 aaKnown RBP28.33■■■□□ 2.13
SRRT-201ENST00000423692 MROH2BQ7Z745 1585 aa28.32■■■□□ 2.12
SRRT-201ENST00000423692 ERCC6Q03468 1493 aa28.2■■■□□ 2.1
SRRT-201ENST00000423692 CUX2O14529 1486 aa28.15■■■□□ 2.1
SRRT-201ENST00000423692 NESP48681 1621 aa28.14■■■□□ 2.09
SRRT-201ENST00000423692 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
SRRT-201ENST00000423692 WIZO95785 1651 aa27.94■■■□□ 2.06
SRRT-201ENST00000423692 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
SRRT-201ENST00000423692 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
SRRT-201ENST00000423692 CADPSQ9ULU8 1353 aa27.84■■■□□ 2.05
SRRT-201ENST00000423692 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
SRRT-201ENST00000423692 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
SRRT-201ENST00000423692 KIF21AQ7Z4S6 1674 aa27.75■■■□□ 2.03
SRRT-201ENST00000423692 TOP2AP11388 1531 aaKnown RBP27.65■■■□□ 2.02
SRRT-201ENST00000423692 MRC2Q9UBG0 1479 aa27.58■■■□□ 2.01
SRRT-201ENST00000423692 CFTRP13569 1480 aa27.57■■■□□ 2
SRRT-201ENST00000423692 WDR62O43379 1518 aa27.52■■■□□ 2
SRRT-201ENST00000423692 CEP164Q9UPV0 1460 aa27.5■■□□□ 1.99
SRRT-201ENST00000423692 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
SRRT-201ENST00000423692 CCDC88BA6NC98 1476 aa27.34■■□□□ 1.97
SRRT-201ENST00000423692 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
SRRT-201ENST00000423692 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
SRRT-201ENST00000423692 TOPBP1Q92547 1522 aa27■■□□□ 1.91
SRRT-201ENST00000423692 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
SRRT-201ENST00000423692 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
SRRT-201ENST00000423692 DNMBPQ6XZF7 1577 aa26.91■■□□□ 1.9
SRRT-201ENST00000423692 OSCARQ8IYS5 282 aa26.88■■□□□ 1.89
SRRT-201ENST00000423692 ZNF608Q9ULD9 1512 aaPredicted RBP26.88■■□□□ 1.89
SRRT-201ENST00000423692 TARBP1Q13395 1621 aaKnown RBP26.75■■□□□ 1.87
SRRT-201ENST00000423692 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
SRRT-201ENST00000423692 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
SRRT-201ENST00000423692 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
SRRT-201ENST00000423692 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.862e-9■■■■□ 24.3
SRRT-201ENST00000423692 SUPT5HO00267 1087 aaKnown RBP26.63■■□□□ 1.85
SRRT-201ENST00000423692 SOGA1O94964 1423 aa26.61■■□□□ 1.85
SRRT-201ENST00000423692 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
SRRT-201ENST00000423692 CUX1P39880 1505 aa26.59■■□□□ 1.85
SRRT-201ENST00000423692 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
SRRT-201ENST00000423692 WDR97A6NE52 1622 aa26.52■■□□□ 1.84
SRRT-201ENST00000423692 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
SRRT-201ENST00000423692 RIMBP3CA6NJZ7 1639 aa26.48■■□□□ 1.83
SRRT-201ENST00000423692 RIMBP3BA6NNM3 1639 aa26.48■■□□□ 1.83
SRRT-201ENST00000423692 RIMBP3Q9UFD9 1639 aa26.48■■□□□ 1.83
SRRT-201ENST00000423692 CHD1O14646 1710 aa26.45■■□□□ 1.82
SRRT-201ENST00000423692 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
SRRT-201ENST00000423692 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
SRRT-201ENST00000423692 FBLN2P98095 1184 aa26.39■■□□□ 1.82
SRRT-201ENST00000423692 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
SRRT-201ENST00000423692 MAGI1Q96QZ7 1491 aaPredicted RBP26.36■■□□□ 1.81
SRRT-201ENST00000423692 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
SRRT-201ENST00000423692 GAPVD1Q14C86 1478 aa26.29■■□□□ 1.8
SRRT-201ENST00000423692 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
SRRT-201ENST00000423692 SYNJ2O15056 1496 aa26.26■■□□□ 1.79
SRRT-201ENST00000423692 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
SRRT-201ENST00000423692 CLASP1Q7Z460 1538 aa26.24■■□□□ 1.79
SRRT-201ENST00000423692 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
SRRT-201ENST00000423692 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
SRRT-201ENST00000423692 BIVM-ERCC5R4GMW8 1640 aa26.21■■□□□ 1.79
SRRT-201ENST00000423692 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
SRRT-201ENST00000423692 SYNJ1O43426 1573 aa26.2■■□□□ 1.79
SRRT-201ENST00000423692 CYB5RLQ6IPT4 315 aa26.2■■□□□ 1.78
SRRT-201ENST00000423692 ARAP1Q96P48 1450 aa26.19■■□□□ 1.78
SRRT-201ENST00000423692 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
SRRT-201ENST00000423692 ADAMTS12P58397 1594 aa26.02■■□□□ 1.76
SRRT-201ENST00000423692 ERICH3Q5RHP9 1530 aa25.99■■□□□ 1.75
SRRT-201ENST00000423692 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
SRRT-201ENST00000423692 NUP160Q12769 1436 aa25.97■■□□□ 1.75
SRRT-201ENST00000423692 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
SRRT-201ENST00000423692 TRHP20396 242 aaPredicted RBP25.81■■□□□ 1.72
SRRT-201ENST00000423692 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
SRRT-201ENST00000423692 ERCC6L2Q5T890 1561 aa25.8■■□□□ 1.72
SRRT-201ENST00000423692 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
SRRT-201ENST00000423692 IGF1RP08069 1367 aa25.71■■□□□ 1.71
SRRT-201ENST00000423692 JPH4Q96JJ6 628 aa25.67■■□□□ 1.7
SRRT-201ENST00000423692 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms