RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
SRRT-219ENST00000641476 ABCC9O60706 1549 aa33.46■■■□□ 2.95
SRRT-219ENST00000641476 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.84
SRRT-219ENST00000641476 DNAJC5BQ9UF47 199 aa31.84■■■□□ 2.69
SRRT-219ENST00000641476 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
SRRT-219ENST00000641476 NACADO15069 1562 aa31.17■■■□□ 2.58
SRRT-219ENST00000641476 PABPN1Q86U42 306 aaKnown RBP eCLIP31.1■■■□□ 2.57
SRRT-219ENST00000641476 DCAF8L2P0C7V8 631 aa31.05■■■□□ 2.56
SRRT-219ENST00000641476 UNC13AQ9UPW8 1703 aa30.72■■■□□ 2.51
SRRT-219ENST00000641476 BICRAQ9NZM4 1560 aa30.63■■■□□ 2.49
SRRT-219ENST00000641476 MYO15BQ96JP2 1530 aa30.55■■■□□ 2.48
SRRT-219ENST00000641476 ZCCHC6Q5VYS8 1495 aaKnown RBP30.39■■■□□ 2.46
SRRT-219ENST00000641476 DCAF1Q9Y4B6 1507 aa30.23■■■□□ 2.43
SRRT-219ENST00000641476 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
SRRT-219ENST00000641476 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
SRRT-219ENST00000641476 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
SRRT-219ENST00000641476 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
SRRT-219ENST00000641476 EIF4G1Q04637 1599 aaKnown RBP29.95■■■□□ 2.39
SRRT-219ENST00000641476 DNAJC5Q9H3Z4 198 aa29.6■■■□□ 2.33
SRRT-219ENST00000641476 CUX2O14529 1486 aa29■■■□□ 2.23
SRRT-219ENST00000641476 ERCC6Q03468 1493 aa28.94■■■□□ 2.22
SRRT-219ENST00000641476 NCAPD3P42695 1498 aa28.81■■■□□ 2.2
SRRT-219ENST00000641476 ATAD2BQ9ULI0 1458 aa28.67■■■□□ 2.18
SRRT-219ENST00000641476 NESP48681 1621 aa28.58■■■□□ 2.17
SRRT-219ENST00000641476 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SRRT-219ENST00000641476 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
SRRT-219ENST00000641476 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
SRRT-219ENST00000641476 BAZ1AQ9NRL2 1556 aaPredicted RBP28.39■■■□□ 2.14
SRRT-219ENST00000641476 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
SRRT-219ENST00000641476 THOC2Q8NI27 1593 aaKnown RBP28.34■■■□□ 2.13
SRRT-219ENST00000641476 PEG3Q9GZU2 1588 aa28.25■■■□□ 2.11
SRRT-219ENST00000641476 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
SRRT-219ENST00000641476 TRIM41Q8WV44 630 aa28.18■■■□□ 2.1
SRRT-219ENST00000641476 MROH2BQ7Z745 1585 aa28.17■■■□□ 2.1
SRRT-219ENST00000641476 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
SRRT-219ENST00000641476 KIF21AQ7Z4S6 1674 aa28.12■■■□□ 2.09
SRRT-219ENST00000641476 CADPSQ9ULU8 1353 aa27.94■■■□□ 2.06
SRRT-219ENST00000641476 MRC2Q9UBG0 1479 aa27.93■■■□□ 2.06
SRRT-219ENST00000641476 WIZO95785 1651 aa27.87■■■□□ 2.05
SRRT-219ENST00000641476 WDR62O43379 1518 aa27.85■■■□□ 2.05
SRRT-219ENST00000641476 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.03
SRRT-219ENST00000641476 FANCD2Q9BXW9 1451 aa27.64■■■□□ 2.01
SRRT-219ENST00000641476 RSF1Q96T23 1441 aaPredicted RBP27.62■■■□□ 2.01
SRRT-219ENST00000641476 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
SRRT-219ENST00000641476 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
SRRT-219ENST00000641476 CFTRP13569 1480 aa27.5■■□□□ 1.99
SRRT-219ENST00000641476 URB2Q14146 1524 aaKnown RBP27.43■■□□□ 1.98
SRRT-219ENST00000641476 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
SRRT-219ENST00000641476 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
SRRT-219ENST00000641476 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
SRRT-219ENST00000641476 PRDM2Q13029 1718 aa27.26■■□□□ 1.95
SRRT-219ENST00000641476 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
SRRT-219ENST00000641476 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
SRRT-219ENST00000641476 IFT140Q96RY7 1462 aa27.17■■□□□ 1.94
SRRT-219ENST00000641476 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
SRRT-219ENST00000641476 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
SRRT-219ENST00000641476 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
SRRT-219ENST00000641476 EIF4G3O43432 1585 aaKnown RBP26.99■■□□□ 1.91
SRRT-219ENST00000641476 TRHP20396 242 aaPredicted RBP26.95■■□□□ 1.9
SRRT-219ENST00000641476 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
SRRT-219ENST00000641476 AQRO60306 1485 aaKnown RBP eCLIP26.89■■□□□ 1.98e-23■■■■■ 34
SRRT-219ENST00000641476 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
SRRT-219ENST00000641476 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
SRRT-219ENST00000641476 FBLN2P98095 1184 aa26.87■■□□□ 1.89
SRRT-219ENST00000641476 CHD1O14646 1710 aa26.84■■□□□ 1.89
SRRT-219ENST00000641476 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
SRRT-219ENST00000641476 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
SRRT-219ENST00000641476 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
SRRT-219ENST00000641476 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
SRRT-219ENST00000641476 SOGA1O94964 1423 aa26.61■■□□□ 1.85
SRRT-219ENST00000641476 SNAPC4Q5SXM2 1469 aa26.61■■□□□ 1.85
SRRT-219ENST00000641476 CLASP1Q7Z460 1538 aa26.56■■□□□ 1.84
SRRT-219ENST00000641476 CHMP7Q8WUX9 453 aaPredicted RBP26.55■■□□□ 1.84
SRRT-219ENST00000641476 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
SRRT-219ENST00000641476 FGD5Q6ZNL6 1462 aa26.5■■□□□ 1.83
SRRT-219ENST00000641476 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SRRT-219ENST00000641476 CUX1P39880 1505 aa26.48■■□□□ 1.83
SRRT-219ENST00000641476 MAGI1Q96QZ7 1491 aaPredicted RBP26.47■■□□□ 1.83
SRRT-219ENST00000641476 WDR97A6NE52 1622 aa26.45■■□□□ 1.82
SRRT-219ENST00000641476 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
SRRT-219ENST00000641476 SUPT5HO00267 1087 aaKnown RBP26.42■■□□□ 1.82
SRRT-219ENST00000641476 SYNJ2O15056 1496 aa26.42■■□□□ 1.82
SRRT-219ENST00000641476 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
SRRT-219ENST00000641476 PBRM1Q86U86 1689 aa26.22■■□□□ 1.79
SRRT-219ENST00000641476 ABCA5Q8WWZ7 1642 aa26.18■■□□□ 1.78
SRRT-219ENST00000641476 ABCA10Q8WWZ4 1543 aa26.18■■□□□ 1.78
SRRT-219ENST00000641476 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
SRRT-219ENST00000641476 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.78
SRRT-219ENST00000641476 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
SRRT-219ENST00000641476 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
SRRT-219ENST00000641476 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
SRRT-219ENST00000641476 CEP170Q5SW79 1584 aa26.04■■□□□ 1.76
SRRT-219ENST00000641476 NUP160Q12769 1436 aa26.02■■□□□ 1.76
SRRT-219ENST00000641476 ADAMTS12P58397 1594 aa26■■□□□ 1.75
SRRT-219ENST00000641476 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
SRRT-219ENST00000641476 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
SRRT-219ENST00000641476 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
SRRT-219ENST00000641476 PRG4Q92954 1404 aaPredicted RBP25.85■■□□□ 1.73
SRRT-219ENST00000641476 KIF13AQ9H1H9 1805 aa25.82■■□□□ 1.72
SRRT-219ENST00000641476 FAM69CQ0P6D2 419 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms