RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 NISCHQ9Y2I1 1504 aa9.12□□□□□ -0.95
BPTF-204ENST00000342579 DCAF8L2P0C7V8 631 aa8.39□□□□□ -1.07
BPTF-204ENST00000342579 ABCC9O60706 1549 aa8.18□□□□□ -1.1
BPTF-204ENST00000342579 CCDC180Q9P1Z9 1646 aa7.96□□□□□ -1.14
BPTF-204ENST00000342579 PABPN1Q86U42 306 aaKnown RBP eCLIP7.78□□□□□ -1.16
BPTF-204ENST00000342579 AEBP2Q6ZN18 517 aaPredicted RBP7.74□□□□□ -1.17
BPTF-204ENST00000342579 RB1CC1Q8TDY2 1594 aa7.73□□□□□ -1.17
BPTF-204ENST00000342579 NACADO15069 1562 aa7.66□□□□□ -1.18
BPTF-204ENST00000342579 SHROOM4Q9ULL8 1493 aa7.63□□□□□ -1.19
BPTF-204ENST00000342579 CHIC1Q5VXU3 224 aa7.55□□□□□ -1.2
BPTF-204ENST00000342579 ZCCHC6Q5VYS8 1495 aaKnown RBP7.52□□□□□ -1.2
BPTF-204ENST00000342579 SCRIBQ14160 1630 aa7.49□□□□□ -1.21
BPTF-204ENST00000342579 MYO15BQ96JP2 1530 aa7.45□□□□□ -1.22
BPTF-204ENST00000342579 DCAF1Q9Y4B6 1507 aa7.43□□□□□ -1.22
BPTF-204ENST00000342579 DNAJC5BQ9UF47 199 aa7.36□□□□□ -1.23
BPTF-204ENST00000342579 SUPT5HO00267 1087 aaKnown RBP7.35□□□□□ -1.23
BPTF-204ENST00000342579 SLC24A1O60721 1099 aa7.34□□□□□ -1.23
BPTF-204ENST00000342579 CECR2Q9BXF3 1484 aa7.32□□□□□ -1.24
BPTF-204ENST00000342579 ERCC6Q03468 1493 aa7.22□□□□□ -1.25
BPTF-204ENST00000342579 EIF4G1Q04637 1599 aaKnown RBP7.2□□□□□ -1.26
BPTF-204ENST00000342579 BICRAQ9NZM4 1560 aa7.19□□□□□ -1.26
BPTF-204ENST00000342579 BAZ1BQ9UIG0 1483 aaKnown RBP7.18□□□□□ -1.26
BPTF-204ENST00000342579 CC2D2AQ9P2K1 1620 aa7.17□□□□□ -1.26
BPTF-204ENST00000342579 BAZ1AQ9NRL2 1556 aaPredicted RBP7.15□□□□□ -1.27
BPTF-204ENST00000342579 SMARCA2P51531 1590 aa7.14□□□□□ -1.27
BPTF-204ENST00000342579 UNC13AQ9UPW8 1703 aa7.12□□□□□ -1.27
BPTF-204ENST00000342579 ATAD2BQ9ULI0 1458 aa7.09□□□□□ -1.27
BPTF-204ENST00000342579 PDS5BQ9NTI5 1447 aa7.08□□□□□ -1.28
BPTF-204ENST00000342579 FAM9AQ8IZU1 332 aaPredicted RBP7.08□□□□□ -1.28
BPTF-204ENST00000342579 NCAPD3P42695 1498 aa7.07□□□□□ -1.28
BPTF-204ENST00000342579 FBLN2P98095 1184 aa7.07□□□□□ -1.28
BPTF-204ENST00000342579 SMARCA4P51532 1647 aa7.03□□□□□ -1.28
BPTF-204ENST00000342579 MROH2BQ7Z745 1585 aa7.02□□□□□ -1.29
BPTF-204ENST00000342579 CADPSQ9ULU8 1353 aa7.01□□□□□ -1.29
BPTF-204ENST00000342579 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
BPTF-204ENST00000342579 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
BPTF-204ENST00000342579 CHMP7Q8WUX9 453 aaPredicted RBP6.94□□□□□ -1.3
BPTF-204ENST00000342579 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
BPTF-204ENST00000342579 TRIM41Q8WV44 630 aa6.93□□□□□ -1.3
BPTF-204ENST00000342579 NESP48681 1621 aa6.92□□□□□ -1.3
BPTF-204ENST00000342579 OSCARQ8IYS5 282 aa6.91□□□□□ -1.3
BPTF-204ENST00000342579 FANCD2Q9BXW9 1451 aa6.9□□□□□ -1.3
BPTF-204ENST00000342579 WIZO95785 1651 aa6.9□□□□□ -1.3
BPTF-204ENST00000342579 TTBK1Q5TCY1 1321 aaPredicted RBP6.9□□□□□ -1.31
BPTF-204ENST00000342579 TOP2AP11388 1531 aaKnown RBP6.88□□□□□ -1.31
BPTF-204ENST00000342579 LAMC3Q9Y6N6 1575 aa6.87□□□□□ -1.31
BPTF-204ENST00000342579 CUX2O14529 1486 aa6.87□□□□□ -1.31
BPTF-204ENST00000342579 MRC2Q9UBG0 1479 aa6.86□□□□□ -1.31
BPTF-204ENST00000342579 NPM1P06748 294 aaKnown RBP eCLIP6.86□□□□□ -1.31
BPTF-204ENST00000342579 CCDC88BA6NC98 1476 aa6.86□□□□□ -1.31
BPTF-204ENST00000342579 EHMT2Q96KQ7 1210 aa6.86□□□□□ -1.31
BPTF-204ENST00000342579 TRHP20396 242 aaPredicted RBP6.85□□□□□ -1.31
BPTF-204ENST00000342579 ABCC8Q09428 1581 aa6.84□□□□□ -1.31
BPTF-204ENST00000342579 RANGAP1P46060 587 aaPredicted RBP6.84□□□□□ -1.32
BPTF-204ENST00000342579 DNAJC5Q9H3Z4 198 aa6.82□□□□□ -1.32
BPTF-204ENST00000342579 CFTRP13569 1480 aa6.82□□□□□ -1.32
BPTF-204ENST00000342579 PEG3Q9GZU2 1588 aa6.82□□□□□ -1.32
BPTF-204ENST00000342579 SOGA1O94964 1423 aa6.81□□□□□ -1.32
BPTF-204ENST00000342579 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.81□□□□□ -1.32
BPTF-204ENST00000342579 HNRNPUL2Q1KMD3 747 aaKnown RBP6.81□□□□□ -1.32
BPTF-204ENST00000342579 ATP1B4Q9UN42 357 aaPredicted RBP6.8□□□□□ -1.32
BPTF-204ENST00000342579 TDRD9Q8NDG6 1382 aaKnown RBP6.79□□□□□ -1.32
BPTF-204ENST00000342579 UBTFP17480 764 aaKnown RBP6.79□□□□□ -1.32
BPTF-204ENST00000342579 CYB5RLQ6IPT4 315 aa6.79□□□□□ -1.32
BPTF-204ENST00000342579 WRNQ14191 1432 aaPredicted RBP eCLIP6.78□□□□□ -1.32
BPTF-204ENST00000342579 IFT140Q96RY7 1462 aa6.76□□□□□ -1.33
BPTF-204ENST00000342579 PRKCSHP14314 528 aaPredicted RBP6.75□□□□□ -1.33
BPTF-204ENST00000342579 PHF23Q9BUL5 403 aaPredicted RBP6.75□□□□□ -1.33
BPTF-204ENST00000342579 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
BPTF-204ENST00000342579 APLP2Q06481 763 aa6.71□□□□□ -1.33
BPTF-204ENST00000342579 AQRO60306 1485 aaKnown RBP eCLIP6.71□□□□□ -1.342e-7■■□□□ 12.5
BPTF-204ENST00000342579 TOPBP1Q92547 1522 aa6.71□□□□□ -1.34
BPTF-204ENST00000342579 MYT1LQ9UL68 1186 aa6.71□□□□□ -1.34
BPTF-204ENST00000342579 KIF27Q86VH2 1401 aa6.7□□□□□ -1.34
BPTF-204ENST00000342579 FGD5Q6ZNL6 1462 aa6.69□□□□□ -1.34
BPTF-204ENST00000342579 RAD54L2Q9Y4B4 1467 aa6.68□□□□□ -1.34
BPTF-204ENST00000342579 URB2Q14146 1524 aaKnown RBP6.67□□□□□ -1.34
BPTF-204ENST00000342579 KIF21AQ7Z4S6 1674 aa6.67□□□□□ -1.34
BPTF-204ENST00000342579 GAPVD1Q14C86 1478 aa6.67□□□□□ -1.34
BPTF-204ENST00000342579 DNMBPQ6XZF7 1577 aa6.67□□□□□ -1.34
BPTF-204ENST00000342579 PLPPR3Q6T4P5 718 aa6.66□□□□□ -1.34
BPTF-204ENST00000342579 CSRNP3Q8WYN3 585 aa6.66□□□□□ -1.34
BPTF-204ENST00000342579 GRIN2BQ13224 1484 aa6.66□□□□□ -1.34
BPTF-204ENST00000342579 WDR62O43379 1518 aa6.66□□□□□ -1.34
BPTF-204ENST00000342579 JPH4Q96JJ6 628 aa6.65□□□□□ -1.34
BPTF-204ENST00000342579 POLA1P09884 1462 aaPredicted RBP6.65□□□□□ -1.34
BPTF-204ENST00000342579 P3H3Q8IVL6 736 aa6.65□□□□□ -1.35
BPTF-204ENST00000342579 CARMIL1Q5VZK9 1371 aa6.63□□□□□ -1.35
BPTF-204ENST00000342579 ARID3CA6NKF2 412 aa6.63□□□□□ -1.35
BPTF-204ENST00000342579 CARMIL2Q6F5E8 1435 aa6.63□□□□□ -1.35
BPTF-204ENST00000342579 ZNF608Q9ULD9 1512 aaPredicted RBP6.63□□□□□ -1.35
BPTF-204ENST00000342579 SNAPC4Q5SXM2 1469 aa6.61□□□□□ -1.35
BPTF-204ENST00000342579 CDK11AQ9UQ88 783 aaPredicted RBP6.61□□□□□ -1.35
BPTF-204ENST00000342579 THOC2Q8NI27 1593 aaKnown RBP6.61□□□□□ -1.35
BPTF-204ENST00000342579 KCNH8Q96L42 1107 aa6.6□□□□□ -1.35
BPTF-204ENST00000342579 FHAD1B1AJZ9 1412 aa6.59□□□□□ -1.35
BPTF-204ENST00000342579 MAGI1Q96QZ7 1491 aaPredicted RBP6.59□□□□□ -1.36
BPTF-204ENST00000342579 SYNJ2O15056 1496 aa6.57□□□□□ -1.36
BPTF-204ENST00000342579 CUX1P39880 1505 aa6.57□□□□□ -1.36
BPTF-204ENST00000342579 FAM69CQ0P6D2 419 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms