RNA–Protein interactions for RNA: ENST00000550968.5

HECTD4-213, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HECTD4, Length 2,313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-213ENST00000550968 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
HECTD4-213ENST00000550968 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
HECTD4-213ENST00000550968 ABCC9O60706 1549 aa20.65■□□□□ 0.9
HECTD4-213ENST00000550968 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
HECTD4-213ENST00000550968 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
HECTD4-213ENST00000550968 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
HECTD4-213ENST00000550968 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
HECTD4-213ENST00000550968 NACADO15069 1562 aa20.05■□□□□ 0.8
HECTD4-213ENST00000550968 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
HECTD4-213ENST00000550968 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
HECTD4-213ENST00000550968 SCRIBQ14160 1630 aa19.78■□□□□ 0.76
HECTD4-213ENST00000550968 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
HECTD4-213ENST00000550968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.46■□□□□ 0.71
HECTD4-213ENST00000550968 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
HECTD4-213ENST00000550968 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
HECTD4-213ENST00000550968 SUPT5HO00267 1087 aaKnown RBP19.05■□□□□ 0.64
HECTD4-213ENST00000550968 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
HECTD4-213ENST00000550968 RSF1Q96T23 1441 aaPredicted RBP18.95■□□□□ 0.62
HECTD4-213ENST00000550968 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
HECTD4-213ENST00000550968 SMARCA4P51532 1647 aa18.9■□□□□ 0.62
HECTD4-213ENST00000550968 EIF4G1Q04637 1599 aaKnown RBP18.84■□□□□ 0.61
HECTD4-213ENST00000550968 WIZO95785 1651 aa18.8■□□□□ 0.6
HECTD4-213ENST00000550968 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
HECTD4-213ENST00000550968 PEG3Q9GZU2 1588 aa18.65■□□□□ 0.58
HECTD4-213ENST00000550968 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
HECTD4-213ENST00000550968 SMARCA2P51531 1590 aa18.62■□□□□ 0.57
HECTD4-213ENST00000550968 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
HECTD4-213ENST00000550968 BAZ1BQ9UIG0 1483 aaKnown RBP18.56■□□□□ 0.56
HECTD4-213ENST00000550968 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
HECTD4-213ENST00000550968 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
HECTD4-213ENST00000550968 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
HECTD4-213ENST00000550968 CCDC88BA6NC98 1476 aa18.41■□□□□ 0.54
HECTD4-213ENST00000550968 HRCP23327 699 aa18.21■□□□□ 0.51
HECTD4-213ENST00000550968 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
HECTD4-213ENST00000550968 CFTRP13569 1480 aa18.07■□□□□ 0.48
HECTD4-213ENST00000550968 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
HECTD4-213ENST00000550968 NESP48681 1621 aa18.05■□□□□ 0.48
HECTD4-213ENST00000550968 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
HECTD4-213ENST00000550968 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
HECTD4-213ENST00000550968 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
HECTD4-213ENST00000550968 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
HECTD4-213ENST00000550968 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
HECTD4-213ENST00000550968 WRNQ14191 1432 aaPredicted RBP eCLIP17.85■□□□□ 0.45
HECTD4-213ENST00000550968 PDS5BQ9NTI5 1447 aa17.83■□□□□ 0.44
HECTD4-213ENST00000550968 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
HECTD4-213ENST00000550968 CEP164Q9UPV0 1460 aa17.78■□□□□ 0.44
HECTD4-213ENST00000550968 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
HECTD4-213ENST00000550968 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
HECTD4-213ENST00000550968 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
HECTD4-213ENST00000550968 CUX1P39880 1505 aa17.75■□□□□ 0.43
HECTD4-213ENST00000550968 ERCC6Q03468 1493 aa17.71■□□□□ 0.42
HECTD4-213ENST00000550968 TOP2BQ02880 1626 aa17.69■□□□□ 0.42
HECTD4-213ENST00000550968 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
HECTD4-213ENST00000550968 PELP1Q8IZL8 1130 aaKnown RBP17.67■□□□□ 0.42
HECTD4-213ENST00000550968 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
HECTD4-213ENST00000550968 TOPBP1Q92547 1522 aa17.65■□□□□ 0.42
HECTD4-213ENST00000550968 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
HECTD4-213ENST00000550968 MRC2Q9UBG0 1479 aa17.62■□□□□ 0.41
HECTD4-213ENST00000550968 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
HECTD4-213ENST00000550968 FGD5Q6ZNL6 1462 aa17.61■□□□□ 0.41
HECTD4-213ENST00000550968 SOGA1O94964 1423 aa17.58■□□□□ 0.4
HECTD4-213ENST00000550968 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
HECTD4-213ENST00000550968 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
HECTD4-213ENST00000550968 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
HECTD4-213ENST00000550968 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
HECTD4-213ENST00000550968 WDR62O43379 1518 aa17.53■□□□□ 0.4
HECTD4-213ENST00000550968 CUX2O14529 1486 aa17.45■□□□□ 0.38
HECTD4-213ENST00000550968 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
HECTD4-213ENST00000550968 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
HECTD4-213ENST00000550968 LOC105371045A0A1W2PR82 267 aa17.41■□□□□ 0.38
HECTD4-213ENST00000550968 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
HECTD4-213ENST00000550968 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.38
HECTD4-213ENST00000550968 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
HECTD4-213ENST00000550968 TARBP1Q13395 1621 aaKnown RBP17.39■□□□□ 0.37
HECTD4-213ENST00000550968 EEA1Q15075 1411 aa17.38■□□□□ 0.37
HECTD4-213ENST00000550968 IFT140Q96RY7 1462 aa17.36■□□□□ 0.37
HECTD4-213ENST00000550968 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
HECTD4-213ENST00000550968 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
HECTD4-213ENST00000550968 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.363e-6■■□□□ 11.7
HECTD4-213ENST00000550968 IGF1RP08069 1367 aa17.3■□□□□ 0.36
HECTD4-213ENST00000550968 GAPVD1Q14C86 1478 aa17.29■□□□□ 0.36
HECTD4-213ENST00000550968 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
HECTD4-213ENST00000550968 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
HECTD4-213ENST00000550968 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
HECTD4-213ENST00000550968 EIF4G3O43432 1585 aaKnown RBP17.22■□□□□ 0.35
HECTD4-213ENST00000550968 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
HECTD4-213ENST00000550968 RAPGEF2Q9Y4G8 1499 aa17.22■□□□□ 0.35
HECTD4-213ENST00000550968 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
HECTD4-213ENST00000550968 KIF21BO75037 1637 aa17.19■□□□□ 0.34
HECTD4-213ENST00000550968 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
HECTD4-213ENST00000550968 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
HECTD4-213ENST00000550968 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
HECTD4-213ENST00000550968 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
HECTD4-213ENST00000550968 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
HECTD4-213ENST00000550968 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
HECTD4-213ENST00000550968 ZEB1P37275 1124 aaPredicted RBP17.13■□□□□ 0.33
HECTD4-213ENST00000550968 CUL7Q14999 1698 aa17.12■□□□□ 0.33
HECTD4-213ENST00000550968 FHAD1B1AJZ9 1412 aa17.08■□□□□ 0.33
HECTD4-213ENST00000550968 ADAMTS12P58397 1594 aa17.08■□□□□ 0.33
HECTD4-213ENST00000550968 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms