RNA–Protein interactions for RNA: ENST00000584931.1

BPTF-218, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-218ENST00000584931 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
BPTF-218ENST00000584931 CHIC1Q5VXU3 224 aa15.22■□□□□ 0.03
BPTF-218ENST00000584931 SENP3Q9H4L4 574 aaPredicted RBP13.49□□□□□ -0.25
BPTF-218ENST00000584931 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
BPTF-218ENST00000584931 FOXD1Q16676 465 aa12.46□□□□□ -0.41
BPTF-218ENST00000584931 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
BPTF-218ENST00000584931 ADRA2BP18089 450 aa11.82□□□□□ -0.52
BPTF-218ENST00000584931 PPP6R1Q9UPN7 881 aa11.8□□□□□ -0.52
BPTF-218ENST00000584931 PIAS4Q8N2W9 510 aaPredicted RBP11.77□□□□□ -0.53
BPTF-218ENST00000584931 MSH5O43196 834 aa11.66□□□□□ -0.54
BPTF-218ENST00000584931 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
BPTF-218ENST00000584931 PPP4R3CPQ6ZMV5 832 aa10.89□□□□□ -0.67
BPTF-218ENST00000584931 POTEDQ86YR6 584 aa10.89□□□□□ -0.67
BPTF-218ENST00000584931 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
BPTF-218ENST00000584931 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
BPTF-218ENST00000584931 DMRT2Q9Y5R5 561 aa10.7□□□□□ -0.7
BPTF-218ENST00000584931 CNKSR2Q8WXI2 1034 aa10.63□□□□□ -0.71
BPTF-218ENST00000584931 KCNA4P22459 653 aa10.52□□□□□ -0.73
BPTF-218ENST00000584931 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
BPTF-218ENST00000584931 NPM3O75607 178 aaKnown RBP10.38□□□□□ -0.75
BPTF-218ENST00000584931 HOXD11P31277 338 aaPredicted RBP10.38□□□□□ -0.75
BPTF-218ENST00000584931 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
BPTF-218ENST00000584931 SLC4A1APQ9BWU0 796 aaKnown RBP10.13□□□□□ -0.79
BPTF-218ENST00000584931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.813e-8■■■□□ 15.3
BPTF-218ENST00000584931 DNAJC5BQ9UF47 199 aa10.01□□□□□ -0.81
BPTF-218ENST00000584931 RNF39Q9H2S5 420 aa9.91□□□□□ -0.82
BPTF-218ENST00000584931 EHMT2Q96KQ7 1210 aa9.89□□□□□ -0.83
BPTF-218ENST00000584931 CACNB1Q02641 598 aaPredicted RBP9.86□□□□□ -0.83
BPTF-218ENST00000584931 C1QBPQ07021 282 aaKnown RBP9.83□□□□□ -0.84
BPTF-218ENST00000584931 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
BPTF-218ENST00000584931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.77□□□□□ -0.85
BPTF-218ENST00000584931 HNRNPUL2Q1KMD3 747 aaKnown RBP9.77□□□□□ -0.85
BPTF-218ENST00000584931 APLP2Q06481 763 aa9.74□□□□□ -0.85
BPTF-218ENST00000584931 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
BPTF-218ENST00000584931 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
BPTF-218ENST00000584931 U3KPZ7 1027 aaPredicted RBP9.7□□□□□ -0.86
BPTF-218ENST00000584931 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
BPTF-218ENST00000584931 ZBTB22O15209 634 aa9.56□□□□□ -0.88
BPTF-218ENST00000584931 CSRNP3Q8WYN3 585 aa9.56□□□□□ -0.88
BPTF-218ENST00000584931 CAPN15O75808 1086 aa9.55□□□□□ -0.88
BPTF-218ENST00000584931 SPINK5Q9NQ38 1064 aaPredicted RBP9.49□□□□□ -0.89
BPTF-218ENST00000584931 ZNF219Q9P2Y4 722 aaPredicted RBP9.48□□□□□ -0.89
BPTF-218ENST00000584931 TRHP20396 242 aaPredicted RBP9.47□□□□□ -0.89
BPTF-218ENST00000584931 ATXN8OSP0DMR3 200 aa9.46□□□□□ -0.9
BPTF-218ENST00000584931 DSG3P32926 999 aa9.36□□□□□ -0.91
BPTF-218ENST00000584931 ABCB7O75027 752 aa9.3□□□□□ -0.92
BPTF-218ENST00000584931 POLA2Q14181 598 aa9.25□□□□□ -0.93
BPTF-218ENST00000584931 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
BPTF-218ENST00000584931 ZBTB12Q9Y330 459 aaPredicted RBP9.21□□□□□ -0.94
BPTF-218ENST00000584931 FBLN2P98095 1184 aa9.18□□□□□ -0.94
BPTF-218ENST00000584931 RBM42Q9BTD8 480 aaKnown RBP9.02□□□□□ -0.97
BPTF-218ENST00000584931 OSCARQ8IYS5 282 aa8.9□□□□□ -0.98
BPTF-218ENST00000584931 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
BPTF-218ENST00000584931 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
BPTF-218ENST00000584931 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
BPTF-218ENST00000584931 ZNF692Q9BU19 519 aaPredicted RBP8.86□□□□□ -0.99
BPTF-218ENST00000584931 MKRN4PQ13434 485 aaPredicted RBP8.85□□□□□ -0.99
BPTF-218ENST00000584931 AKT1S1Q96B36 256 aa8.83□□□□□ -1
BPTF-218ENST00000584931 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
BPTF-218ENST00000584931 FKBP8Q14318 412 aa8.79□□□□□ -1
BPTF-218ENST00000584931 RTN4Q9NQC3 1192 aaKnown RBP8.77□□□□□ -1.01
BPTF-218ENST00000584931 PABPN1Q86U42 306 aaKnown RBP eCLIP8.71□□□□□ -1.02
BPTF-218ENST00000584931 REM2Q8IYK8 340 aaPredicted RBP8.71□□□□□ -1.02
BPTF-218ENST00000584931 SLC24A1O60721 1099 aa8.69□□□□□ -1.02
BPTF-218ENST00000584931 CHRDL2Q6WN34 429 aa8.67□□□□□ -1.02
BPTF-218ENST00000584931 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
BPTF-218ENST00000584931 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
BPTF-218ENST00000584931 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
BPTF-218ENST00000584931 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
BPTF-218ENST00000584931 POTEHQ6S545 545 aa8.62□□□□□ -1.03
BPTF-218ENST00000584931 PITPNM1O00562 1244 aa8.6□□□□□ -1.03
BPTF-218ENST00000584931 FBXO3Q9UK99 471 aa8.6□□□□□ -1.03
BPTF-218ENST00000584931 PLEKHG5O94827 1062 aa8.58□□□□□ -1.04
BPTF-218ENST00000584931 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
BPTF-218ENST00000584931 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
BPTF-218ENST00000584931 PIP4P2Q8N4L2 257 aa8.5□□□□□ -1.05
BPTF-218ENST00000584931 FXR2P51116 673 aaKnown RBP eCLIP8.48□□□□□ -1.055e-7■■□□□ 13.8
BPTF-218ENST00000584931 PROM2Q8N271 834 aa8.47□□□□□ -1.05
BPTF-218ENST00000584931 PLCD3Q8N3E9 789 aa8.47□□□□□ -1.05
BPTF-218ENST00000584931 MIER1Q8N108 512 aa8.45□□□□□ -1.06
BPTF-218ENST00000584931 PRKAR2AP13861 404 aaKnown RBP8.42□□□□□ -1.06
BPTF-218ENST00000584931 ZBTB47Q9UFB7 747 aaPredicted RBP8.42□□□□□ -1.06
BPTF-218ENST00000584931 KLHL34Q8N239 644 aa8.38□□□□□ -1.07
BPTF-218ENST00000584931 NPM1P06748 294 aaKnown RBP eCLIP8.36□□□□□ -1.07
BPTF-218ENST00000584931 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
BPTF-218ENST00000584931 CHADLQ6NUI6 762 aa8.34□□□□□ -1.07
BPTF-218ENST00000584931 HAX1O00165 279 aa8.33□□□□□ -1.08
BPTF-218ENST00000584931 PAK3O75914 559 aaPredicted RBP8.3□□□□□ -1.08
BPTF-218ENST00000584931 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
BPTF-218ENST00000584931 FARP1Q9Y4F1 1045 aaPredicted RBP8.27□□□□□ -1.09
BPTF-218ENST00000584931 SPOCK2Q92563 424 aa8.21□□□□□ -1.1
BPTF-218ENST00000584931 C19orf67A6NJJ6 358 aa8.2□□□□□ -1.1
BPTF-218ENST00000584931 SP7Q8TDD2 431 aaPredicted RBP8.2□□□□□ -1.1
BPTF-218ENST00000584931 FAM212AQ96EL1 285 aa8.18□□□□□ -1.1
BPTF-218ENST00000584931 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
BPTF-218ENST00000584931 DCAF8Q5TAQ9 597 aa8.16□□□□□ -1.1
BPTF-218ENST00000584931 IFNLR1Q8IU57 520 aaPredicted RBP8.15□□□□□ -1.1
BPTF-218ENST00000584931 CIZ1Q9ULV3 898 aaPredicted RBP8.15□□□□□ -1.1
BPTF-218ENST00000584931 GSE1Q14687 1217 aa8.14□□□□□ -1.11
BPTF-218ENST00000584931 TSPYL2Q9H2G4 693 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms