Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TRAPPC1Q9Y5R8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 TUBB8P12-201ENST00000308911 1335 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 TUBB7P-202ENST00000428444 1305 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 TUBB8P7-204ENST00000567960 1332 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AC015656.1-201ENST00000624209 3578 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AC105036.2-201ENST00000569468 176 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AC060766.5-201ENST00000590539 871 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AL109954.1-202ENST00000564051 2148 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 AC002310.6-201ENST00000624451 1377 ntBASIC12.68□□□□□ -0.38
TRAPPC1Q9Y5R8 FRMD8P1-201ENST00000440433 1524 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC007686.3-201ENST00000619017 3487 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AL137784.3-201ENST00000623858 2288 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC091874.3-201ENST00000512672 1195 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC104390.1-201ENST00000555663 520 ntBASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRAPPC1Q9Y5R8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms