RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
ITSN2-203ENST00000406921 NISCHQ9Y2I1 1504 aa26.41■■□□□ 1.82
ITSN2-203ENST00000406921 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
ITSN2-203ENST00000406921 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
ITSN2-203ENST00000406921 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
ITSN2-203ENST00000406921 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
ITSN2-203ENST00000406921 TTBK1Q5TCY1 1321 aaPredicted RBP23.79■■□□□ 1.4
ITSN2-203ENST00000406921 RANGAP1P46060 587 aaPredicted RBP23.7■■□□□ 1.38
ITSN2-203ENST00000406921 APLP2Q06481 763 aa23.66■■□□□ 1.38
ITSN2-203ENST00000406921 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
ITSN2-203ENST00000406921 PCGF6Q9BYE7 350 aa23.43■■□□□ 1.34
ITSN2-203ENST00000406921 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
ITSN2-203ENST00000406921 UBTFP17480 764 aaKnown RBP23.25■■□□□ 1.31
ITSN2-203ENST00000406921 PPARGC1BQ86YN6 1023 aaKnown RBP23.07■■□□□ 1.28
ITSN2-203ENST00000406921 ABCC9O60706 1549 aa23.05■■□□□ 1.28
ITSN2-203ENST00000406921 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.26
ITSN2-203ENST00000406921 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
ITSN2-203ENST00000406921 LOC105371045A0A1W2PR82 267 aa22.83■■□□□ 1.25
ITSN2-203ENST00000406921 CHIC1Q5VXU3 224 aa22.77■■□□□ 1.24
ITSN2-203ENST00000406921 ITGAEP38570 1179 aa22.54■■□□□ 1.2
ITSN2-203ENST00000406921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.52■■□□□ 1.19
ITSN2-203ENST00000406921 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.19
ITSN2-203ENST00000406921 ZEB1P37275 1124 aaPredicted RBP22.43■■□□□ 1.18
ITSN2-203ENST00000406921 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
ITSN2-203ENST00000406921 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
ITSN2-203ENST00000406921 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
ITSN2-203ENST00000406921 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
ITSN2-203ENST00000406921 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
ITSN2-203ENST00000406921 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
ITSN2-203ENST00000406921 FBLN2P98095 1184 aa22.01■■□□□ 1.11
ITSN2-203ENST00000406921 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
ITSN2-203ENST00000406921 HRCP23327 699 aa21.95■■□□□ 1.1
ITSN2-203ENST00000406921 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
ITSN2-203ENST00000406921 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
ITSN2-203ENST00000406921 P3H3Q8IVL6 736 aa21.84■■□□□ 1.09
ITSN2-203ENST00000406921 ARID3CA6NKF2 412 aa21.82■■□□□ 1.08
ITSN2-203ENST00000406921 ZCCHC6Q5VYS8 1495 aaKnown RBP21.81■■□□□ 1.08
ITSN2-203ENST00000406921 CSRNP3Q8WYN3 585 aa21.73■■□□□ 1.07
ITSN2-203ENST00000406921 NEFLP07196 543 aa21.72■■□□□ 1.07
ITSN2-203ENST00000406921 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
ITSN2-203ENST00000406921 NEUROD1Q13562 356 aa21.64■■□□□ 1.05
ITSN2-203ENST00000406921 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
ITSN2-203ENST00000406921 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.04
ITSN2-203ENST00000406921 ZNF326Q5BKZ1 582 aaKnown RBP21.48■■□□□ 1.03
ITSN2-203ENST00000406921 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
ITSN2-203ENST00000406921 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
ITSN2-203ENST00000406921 ZNF777Q9ULD5 760 aaPredicted RBP21.41■■□□□ 1.02
ITSN2-203ENST00000406921 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
ITSN2-203ENST00000406921 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
ITSN2-203ENST00000406921 CDK11AQ9UQ88 783 aaPredicted RBP21.16■□□□□ 0.98
ITSN2-203ENST00000406921 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
ITSN2-203ENST00000406921 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
ITSN2-203ENST00000406921 BCANQ96GW7 911 aa21.04■□□□□ 0.96
ITSN2-203ENST00000406921 PLPPR3Q6T4P5 718 aa21.02■□□□□ 0.95
ITSN2-203ENST00000406921 ZNF316A6NFI3 1004 aaPredicted RBP21.01■□□□□ 0.95
ITSN2-203ENST00000406921 NACADO15069 1562 aa21■□□□□ 0.95
ITSN2-203ENST00000406921 CECR2Q9BXF3 1484 aa20.99■□□□□ 0.95
ITSN2-203ENST00000406921 ANP32CO43423 234 aa20.99■□□□□ 0.95
ITSN2-203ENST00000406921 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
ITSN2-203ENST00000406921 CHGAP10645 457 aaKnown RBP20.95■□□□□ 0.94
ITSN2-203ENST00000406921 BAZ1BQ9UIG0 1483 aaKnown RBP20.92■□□□□ 0.94
ITSN2-203ENST00000406921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.942e-6■■□□□ 13.2
ITSN2-203ENST00000406921 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
ITSN2-203ENST00000406921 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
ITSN2-203ENST00000406921 CLIP1P30622 1438 aa20.88■□□□□ 0.93
ITSN2-203ENST00000406921 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
ITSN2-203ENST00000406921 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
ITSN2-203ENST00000406921 DCAF1Q9Y4B6 1507 aa20.85■□□□□ 0.93
ITSN2-203ENST00000406921 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
ITSN2-203ENST00000406921 ESF1Q9H501 851 aaKnown RBP20.84■□□□□ 0.93
ITSN2-203ENST00000406921 KCNH8Q96L42 1107 aa20.83■□□□□ 0.93
ITSN2-203ENST00000406921 TONSLQ96HA7 1378 aa20.8■□□□□ 0.92
ITSN2-203ENST00000406921 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
ITSN2-203ENST00000406921 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
ITSN2-203ENST00000406921 GTF3C3Q9Y5Q9 886 aa20.78■□□□□ 0.92
ITSN2-203ENST00000406921 STAG3Q9UJ98 1225 aa20.77■□□□□ 0.92
ITSN2-203ENST00000406921 SLC24A1O60721 1099 aa20.76■□□□□ 0.91
ITSN2-203ENST00000406921 RRP7BPQ9NSQ0 103 aa20.75■□□□□ 0.91
ITSN2-203ENST00000406921 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
ITSN2-203ENST00000406921 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
ITSN2-203ENST00000406921 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
ITSN2-203ENST00000406921 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
ITSN2-203ENST00000406921 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
ITSN2-203ENST00000406921 CEP162Q5TB80 1403 aa20.71■□□□□ 0.91
ITSN2-203ENST00000406921 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
ITSN2-203ENST00000406921 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
ITSN2-203ENST00000406921 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.9
ITSN2-203ENST00000406921 GOLGA3Q08378 1498 aa20.64■□□□□ 0.89
ITSN2-203ENST00000406921 EEA1Q15075 1411 aa20.6■□□□□ 0.89
ITSN2-203ENST00000406921 MROH2BQ7Z745 1585 aa20.6■□□□□ 0.89
ITSN2-203ENST00000406921 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
ITSN2-203ENST00000406921 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
ITSN2-203ENST00000406921 SOGA1O94964 1423 aa20.56■□□□□ 0.88
ITSN2-203ENST00000406921 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
ITSN2-203ENST00000406921 NEFMP07197 916 aa20.54■□□□□ 0.88
ITSN2-203ENST00000406921 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
ITSN2-203ENST00000406921 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
ITSN2-203ENST00000406921 RGL3Q3MIN7 710 aa20.52■□□□□ 0.87
ITSN2-203ENST00000406921 TNIKQ9UKE5 1360 aa20.5■□□□□ 0.87
ITSN2-203ENST00000406921 HNRNPUQ00839 825 aaKnown RBP eCLIP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms