RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
PCM1-202ENST00000327578 PELP1Q8IZL8 1130 aaKnown RBP22.52■■□□□ 1.2
PCM1-202ENST00000327578 SUPT5HO00267 1087 aaKnown RBP21.88■■□□□ 1.09
PCM1-202ENST00000327578 ERICH6Q7L0X2 663 aa21.81■■□□□ 1.08
PCM1-202ENST00000327578 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
PCM1-202ENST00000327578 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
PCM1-202ENST00000327578 MYT1Q01538 1121 aa21.39■■□□□ 1.01
PCM1-202ENST00000327578 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
PCM1-202ENST00000327578 APLP2Q06481 763 aa21.28■■□□□ 1
PCM1-202ENST00000327578 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
PCM1-202ENST00000327578 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
PCM1-202ENST00000327578 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
PCM1-202ENST00000327578 NEFLP07196 543 aa20.93■□□□□ 0.94
PCM1-202ENST00000327578 YTHDC1Q96MU7 727 aaKnown RBP20.86■□□□□ 0.93
PCM1-202ENST00000327578 ZEB1P37275 1124 aaPredicted RBP20.85■□□□□ 0.93
PCM1-202ENST00000327578 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
PCM1-202ENST00000327578 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
PCM1-202ENST00000327578 RANGAP1P46060 587 aaPredicted RBP20.59■□□□□ 0.89
PCM1-202ENST00000327578 ATP1B4Q9UN42 357 aaPredicted RBP20.5■□□□□ 0.87
PCM1-202ENST00000327578 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
PCM1-202ENST00000327578 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
PCM1-202ENST00000327578 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
PCM1-202ENST00000327578 UBTFP17480 764 aaKnown RBP20.13■□□□□ 0.81
PCM1-202ENST00000327578 ZNF316A6NFI3 1004 aaPredicted RBP20.12■□□□□ 0.81
PCM1-202ENST00000327578 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
PCM1-202ENST00000327578 POLR3GLQ9BT43 218 aa20.07■□□□□ 0.8
PCM1-202ENST00000327578 HRCP23327 699 aa19.96■□□□□ 0.79
PCM1-202ENST00000327578 CNGB1Q14028 1251 aaPredicted RBP19.95■□□□□ 0.78
PCM1-202ENST00000327578 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
PCM1-202ENST00000327578 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
PCM1-202ENST00000327578 ITGAEP38570 1179 aa19.78■□□□□ 0.76
PCM1-202ENST00000327578 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
PCM1-202ENST00000327578 MYT1LQ9UL68 1186 aa19.68■□□□□ 0.74
PCM1-202ENST00000327578 DIEXFQ68CQ4 756 aaKnown RBP19.65■□□□□ 0.74
PCM1-202ENST00000327578 BCANQ96GW7 911 aa19.58■□□□□ 0.73
PCM1-202ENST00000327578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
PCM1-202ENST00000327578 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
PCM1-202ENST00000327578 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
PCM1-202ENST00000327578 GTF3C3Q9Y5Q9 886 aa19.51■□□□□ 0.71
PCM1-202ENST00000327578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.47■□□□□ 0.71
PCM1-202ENST00000327578 EIF5BO60841 1220 aaKnown RBP19.47■□□□□ 0.71
PCM1-202ENST00000327578 ZBTB47Q9UFB7 747 aaPredicted RBP19.36■□□□□ 0.69
PCM1-202ENST00000327578 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
PCM1-202ENST00000327578 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
PCM1-202ENST00000327578 GLIPR1L2Q4G1C9 344 aa19.29■□□□□ 0.68
PCM1-202ENST00000327578 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
PCM1-202ENST00000327578 ANP32CO43423 234 aa19.21■□□□□ 0.67
PCM1-202ENST00000327578 NPM2Q86SE8 214 aaKnown RBP19.19■□□□□ 0.66
PCM1-202ENST00000327578 CANXP27824 592 aaKnown RBP19.18■□□□□ 0.66
PCM1-202ENST00000327578 NEUROD1Q13562 356 aa19.18■□□□□ 0.66
PCM1-202ENST00000327578 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
PCM1-202ENST00000327578 SLC24A1O60721 1099 aa19.14■□□□□ 0.65
PCM1-202ENST00000327578 FAM50AQ14320 339 aaKnown RBP19.12■□□□□ 0.65
PCM1-202ENST00000327578 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
PCM1-202ENST00000327578 HSP90AA1P07900 732 aaKnown RBP18.99■□□□□ 0.63
PCM1-202ENST00000327578 ACIN1Q9UKV3 1341 aaKnown RBP18.99■□□□□ 0.63
PCM1-202ENST00000327578 NBR1Q14596 966 aa18.97■□□□□ 0.63
PCM1-202ENST00000327578 ZNF326Q5BKZ1 582 aaKnown RBP18.97■□□□□ 0.63
PCM1-202ENST00000327578 ARXQ96QS3 562 aa18.91■□□□□ 0.62
PCM1-202ENST00000327578 NEFMP07197 916 aa18.85■□□□□ 0.61
PCM1-202ENST00000327578 FKBP8Q14318 412 aa18.85■□□□□ 0.61
PCM1-202ENST00000327578 UPF2Q9HAU5 1272 aaKnown RBP18.82■□□□□ 0.6
PCM1-202ENST00000327578 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
PCM1-202ENST00000327578 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCM1-202ENST00000327578 TRIM44Q96DX7 344 aaPredicted RBP18.56■□□□□ 0.56
PCM1-202ENST00000327578 CCDC136Q96JN2 1154 aa18.56■□□□□ 0.56
PCM1-202ENST00000327578 SALL2Q9Y467 1007 aaPredicted RBP18.55■□□□□ 0.56
PCM1-202ENST00000327578 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
PCM1-202ENST00000327578 CDK11BP21127 795 aaKnown RBP18.53■□□□□ 0.56
PCM1-202ENST00000327578 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.45■□□□□ 0.54
PCM1-202ENST00000327578 IRX6P78412 446 aaPredicted RBP18.4■□□□□ 0.54
PCM1-202ENST00000327578 DNTTIP2Q5QJE6 756 aaKnown RBP18.39■□□□□ 0.53
PCM1-202ENST00000327578 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
PCM1-202ENST00000327578 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
PCM1-202ENST00000327578 DDRGK1Q96HY6 314 aa18.37■□□□□ 0.53
PCM1-202ENST00000327578 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
PCM1-202ENST00000327578 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
PCM1-202ENST00000327578 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
PCM1-202ENST00000327578 BECN1Q14457 450 aa18.35■□□□□ 0.53
PCM1-202ENST00000327578 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
PCM1-202ENST00000327578 PTMAP06454 111 aaKnown RBP18.33■□□□□ 0.53
PCM1-202ENST00000327578 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
PCM1-202ENST00000327578 ANP32EQ9BTT0 268 aa18.3■□□□□ 0.52
PCM1-202ENST00000327578 GOLGA6L22H0YM25 854 aa18.27■□□□□ 0.52
PCM1-202ENST00000327578 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
PCM1-202ENST00000327578 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
PCM1-202ENST00000327578 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
PCM1-202ENST00000327578 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
PCM1-202ENST00000327578 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
PCM1-202ENST00000327578 P3H3Q8IVL6 736 aa18.23■□□□□ 0.51
PCM1-202ENST00000327578 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
PCM1-202ENST00000327578 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
PCM1-202ENST00000327578 FBLN2P98095 1184 aa18.22■□□□□ 0.51
PCM1-202ENST00000327578 ZRSR1Q15695 479 aaKnown RBP18.19■□□□□ 0.5
PCM1-202ENST00000327578 CHGAP10645 457 aaKnown RBP18.18■□□□□ 0.5
PCM1-202ENST00000327578 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
PCM1-202ENST00000327578 STAG3Q9UJ98 1225 aa18.14■□□□□ 0.49
PCM1-202ENST00000327578 TULP1O00294 542 aaPredicted RBP18.14■□□□□ 0.49
PCM1-202ENST00000327578 MIER1Q8N108 512 aa18.1■□□□□ 0.49
PCM1-202ENST00000327578 LAS1LQ9Y4W2 734 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms