RNA–Protein interactions for RNA: ENST00000338154.10

PHF8-202, Transcript of PHD finger protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHF8, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-202ENST00000338154 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
PHF8-202ENST00000338154 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
PHF8-202ENST00000338154 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
PHF8-202ENST00000338154 PELP1Q8IZL8 1130 aaKnown RBP22.43■■□□□ 1.18
PHF8-202ENST00000338154 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
PHF8-202ENST00000338154 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.12
PHF8-202ENST00000338154 PCGF6Q9BYE7 350 aa21.9■■□□□ 1.1
PHF8-202ENST00000338154 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
PHF8-202ENST00000338154 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.08
PHF8-202ENST00000338154 APLP2Q06481 763 aa21.79■■□□□ 1.08
PHF8-202ENST00000338154 CENPBP07199 599 aaPredicted RBP21.58■■□□□ 1.05
PHF8-202ENST00000338154 RANGAP1P46060 587 aaPredicted RBP21.55■■□□□ 1.04
PHF8-202ENST00000338154 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
PHF8-202ENST00000338154 CCER1Q8TC90 406 aaPredicted RBP21.44■■□□□ 1.02
PHF8-202ENST00000338154 MYT1Q01538 1121 aa21.34■■□□□ 1.01
PHF8-202ENST00000338154 ATP1B4Q9UN42 357 aaPredicted RBP21.21■□□□□ 0.99
PHF8-202ENST00000338154 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
PHF8-202ENST00000338154 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
PHF8-202ENST00000338154 NEFLP07196 543 aa21.15■□□□□ 0.98
PHF8-202ENST00000338154 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
PHF8-202ENST00000338154 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
PHF8-202ENST00000338154 UBTFP17480 764 aaKnown RBP20.88■□□□□ 0.93
PHF8-202ENST00000338154 CNGB1Q14028 1251 aaPredicted RBP20.73■□□□□ 0.91
PHF8-202ENST00000338154 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
PHF8-202ENST00000338154 POLR3GLQ9BT43 218 aa20.69■□□□□ 0.9
PHF8-202ENST00000338154 HRCP23327 699 aa20.63■□□□□ 0.89
PHF8-202ENST00000338154 ITGAEP38570 1179 aa20.6■□□□□ 0.89
PHF8-202ENST00000338154 TRIM26Q12899 539 aaPredicted RBP20.52■□□□□ 0.87
PHF8-202ENST00000338154 HNRNPUL2Q1KMD3 747 aaKnown RBP20.38■□□□□ 0.85
PHF8-202ENST00000338154 LOC105371045A0A1W2PR82 267 aa20.36■□□□□ 0.85
PHF8-202ENST00000338154 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
PHF8-202ENST00000338154 MYT1LQ9UL68 1186 aa20.28■□□□□ 0.84
PHF8-202ENST00000338154 BCANQ96GW7 911 aa20.26■□□□□ 0.83
PHF8-202ENST00000338154 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
PHF8-202ENST00000338154 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
PHF8-202ENST00000338154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
PHF8-202ENST00000338154 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
PHF8-202ENST00000338154 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
PHF8-202ENST00000338154 DIEXFQ68CQ4 756 aaKnown RBP20.17■□□□□ 0.82
PHF8-202ENST00000338154 GTF3C3Q9Y5Q9 886 aa20.07■□□□□ 0.8
PHF8-202ENST00000338154 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
PHF8-202ENST00000338154 NEUROD1Q13562 356 aa19.88■□□□□ 0.77
PHF8-202ENST00000338154 FAM50AQ14320 339 aaKnown RBP19.8■□□□□ 0.76
PHF8-202ENST00000338154 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
PHF8-202ENST00000338154 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
PHF8-202ENST00000338154 ZNF326Q5BKZ1 582 aaKnown RBP19.72■□□□□ 0.75
PHF8-202ENST00000338154 EIF5BO60841 1220 aaKnown RBP19.71■□□□□ 0.75
PHF8-202ENST00000338154 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
PHF8-202ENST00000338154 ANP32CO43423 234 aa19.63■□□□□ 0.73
PHF8-202ENST00000338154 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
PHF8-202ENST00000338154 ZBTB47Q9UFB7 747 aaPredicted RBP19.55■□□□□ 0.72
PHF8-202ENST00000338154 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
PHF8-202ENST00000338154 ACIN1Q9UKV3 1341 aaKnown RBP19.54■□□□□ 0.72
PHF8-202ENST00000338154 ANP32AP39687 249 aaKnown RBP19.47■□□□□ 0.71
PHF8-202ENST00000338154 FKBP8Q14318 412 aa19.39■□□□□ 0.69
PHF8-202ENST00000338154 NBR1Q14596 966 aa19.35■□□□□ 0.69
PHF8-202ENST00000338154 ARXQ96QS3 562 aa19.35■□□□□ 0.69
PHF8-202ENST00000338154 ARID3CA6NKF2 412 aa19.29■□□□□ 0.68
PHF8-202ENST00000338154 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
PHF8-202ENST00000338154 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
PHF8-202ENST00000338154 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
PHF8-202ENST00000338154 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
PHF8-202ENST00000338154 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
PHF8-202ENST00000338154 NEFMP07197 916 aa19.14■□□□□ 0.65
PHF8-202ENST00000338154 HNRNPUQ00839 825 aaKnown RBP eCLIP19.14■□□□□ 0.65
PHF8-202ENST00000338154 IRX6P78412 446 aaPredicted RBP19.1■□□□□ 0.65
PHF8-202ENST00000338154 FBLN2P98095 1184 aa19.1■□□□□ 0.65
PHF8-202ENST00000338154 DDX10Q13206 875 aaKnown RBP19.07■□□□□ 0.64
PHF8-202ENST00000338154 GLIPR1L2Q4G1C9 344 aa19.07■□□□□ 0.64
PHF8-202ENST00000338154 ZNF777Q9ULD5 760 aaPredicted RBP19.04■□□□□ 0.64
PHF8-202ENST00000338154 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
PHF8-202ENST00000338154 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
PHF8-202ENST00000338154 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
PHF8-202ENST00000338154 CCDC136Q96JN2 1154 aa18.98■□□□□ 0.63
PHF8-202ENST00000338154 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
PHF8-202ENST00000338154 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
PHF8-202ENST00000338154 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
PHF8-202ENST00000338154 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
PHF8-202ENST00000338154 TONSLQ96HA7 1378 aa18.84■□□□□ 0.61
PHF8-202ENST00000338154 MIER1Q8N108 512 aa18.84■□□□□ 0.61
PHF8-202ENST00000338154 RTN4Q9NQC3 1192 aaKnown RBP18.82■□□□□ 0.6
PHF8-202ENST00000338154 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
PHF8-202ENST00000338154 MRS2Q9HD23 443 aa18.76■□□□□ 0.59
PHF8-202ENST00000338154 TPRNQ4KMQ1 711 aa18.75■□□□□ 0.59
PHF8-202ENST00000338154 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
PHF8-202ENST00000338154 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
PHF8-202ENST00000338154 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
PHF8-202ENST00000338154 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
PHF8-202ENST00000338154 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
PHF8-202ENST00000338154 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.583e-6■■■■□ 20.8
PHF8-202ENST00000338154 STAG3Q9UJ98 1225 aa18.68■□□□□ 0.58
PHF8-202ENST00000338154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.68■□□□□ 0.581e-6■■■■□ 19.6
PHF8-202ENST00000338154 TRIM44Q96DX7 344 aaPredicted RBP18.66■□□□□ 0.58
PHF8-202ENST00000338154 NCLP19338 710 aaKnown RBP18.65■□□□□ 0.58
PHF8-202ENST00000338154 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
PHF8-202ENST00000338154 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PHF8-202ENST00000338154 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
PHF8-202ENST00000338154 ABCC9O60706 1549 aa18.57■□□□□ 0.56
PHF8-202ENST00000338154 ESF1Q9H501 851 aaKnown RBP18.56■□□□□ 0.56
PHF8-202ENST00000338154 NAP1L5Q96NT1 182 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms