RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
SHTN1-204ENST00000392903 CCDC180Q9P1Z9 1646 aa26.78■■□□□ 1.88
SHTN1-204ENST00000392903 SHROOM4Q9ULL8 1493 aa26.62■■□□□ 1.85
SHTN1-204ENST00000392903 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
SHTN1-204ENST00000392903 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
SHTN1-204ENST00000392903 SUPT5HO00267 1087 aaKnown RBP25.97■■□□□ 1.75
SHTN1-204ENST00000392903 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
SHTN1-204ENST00000392903 ABCC9O60706 1549 aa25.18■■□□□ 1.62
SHTN1-204ENST00000392903 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
SHTN1-204ENST00000392903 HRCP23327 699 aa25.08■■□□□ 1.61
SHTN1-204ENST00000392903 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
SHTN1-204ENST00000392903 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
SHTN1-204ENST00000392903 NACADO15069 1562 aa24.86■■□□□ 1.57
SHTN1-204ENST00000392903 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
SHTN1-204ENST00000392903 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
SHTN1-204ENST00000392903 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
SHTN1-204ENST00000392903 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
SHTN1-204ENST00000392903 MROH2BQ7Z745 1585 aa24.4■■□□□ 1.5
SHTN1-204ENST00000392903 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
SHTN1-204ENST00000392903 LOC105371045A0A1W2PR82 267 aa24.34■■□□□ 1.49
SHTN1-204ENST00000392903 WIZO95785 1651 aa24.26■■□□□ 1.47
SHTN1-204ENST00000392903 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
SHTN1-204ENST00000392903 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
SHTN1-204ENST00000392903 PELP1Q8IZL8 1130 aaKnown RBP24.15■■□□□ 1.46
SHTN1-204ENST00000392903 BAZ1AQ9NRL2 1556 aaPredicted RBP24.12■■□□□ 1.45
SHTN1-204ENST00000392903 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
SHTN1-204ENST00000392903 FAM9AQ8IZU1 332 aaPredicted RBP24.03■■□□□ 1.44
SHTN1-204ENST00000392903 SMARCA4P51532 1647 aa23.96■■□□□ 1.43
SHTN1-204ENST00000392903 BICRAQ9NZM4 1560 aa23.88■■□□□ 1.41
SHTN1-204ENST00000392903 EHMT2Q96KQ7 1210 aa23.88■■□□□ 1.41
SHTN1-204ENST00000392903 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
SHTN1-204ENST00000392903 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.4
SHTN1-204ENST00000392903 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
SHTN1-204ENST00000392903 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
SHTN1-204ENST00000392903 SMARCA2P51531 1590 aa23.7■■□□□ 1.39
SHTN1-204ENST00000392903 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
SHTN1-204ENST00000392903 ABCC8Q09428 1581 aa23.61■■□□□ 1.37
SHTN1-204ENST00000392903 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
SHTN1-204ENST00000392903 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
SHTN1-204ENST00000392903 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
SHTN1-204ENST00000392903 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
SHTN1-204ENST00000392903 SOGA1O94964 1423 aa23.34■■□□□ 1.33
SHTN1-204ENST00000392903 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
SHTN1-204ENST00000392903 WRNQ14191 1432 aaPredicted RBP eCLIP23.24■■□□□ 1.31
SHTN1-204ENST00000392903 MYT1Q01538 1121 aa23.23■■□□□ 1.31
SHTN1-204ENST00000392903 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
SHTN1-204ENST00000392903 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
SHTN1-204ENST00000392903 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
SHTN1-204ENST00000392903 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
SHTN1-204ENST00000392903 EEA1Q15075 1411 aa23.08■■□□□ 1.29
SHTN1-204ENST00000392903 CEP162Q5TB80 1403 aa23.05■■□□□ 1.28
SHTN1-204ENST00000392903 NCAPD3P42695 1498 aa23.02■■□□□ 1.28
SHTN1-204ENST00000392903 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.28
SHTN1-204ENST00000392903 TTBK1Q5TCY1 1321 aaPredicted RBP23■■□□□ 1.27
SHTN1-204ENST00000392903 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
SHTN1-204ENST00000392903 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
SHTN1-204ENST00000392903 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
SHTN1-204ENST00000392903 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
SHTN1-204ENST00000392903 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
SHTN1-204ENST00000392903 CENPBP07199 599 aaPredicted RBP22.84■■□□□ 1.25
SHTN1-204ENST00000392903 GTF3C3Q9Y5Q9 886 aa22.83■■□□□ 1.25
SHTN1-204ENST00000392903 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
SHTN1-204ENST00000392903 KIF21BO75037 1637 aa22.78■■□□□ 1.24
SHTN1-204ENST00000392903 RAPGEF2Q9Y4G8 1499 aa22.77■■□□□ 1.23
SHTN1-204ENST00000392903 CFTRP13569 1480 aa22.76■■□□□ 1.23
SHTN1-204ENST00000392903 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
SHTN1-204ENST00000392903 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
SHTN1-204ENST00000392903 DIEXFQ68CQ4 756 aaKnown RBP22.73■■□□□ 1.23
SHTN1-204ENST00000392903 CUX1P39880 1505 aa22.72■■□□□ 1.23
SHTN1-204ENST00000392903 CCER1Q8TC90 406 aaPredicted RBP22.71■■□□□ 1.23
SHTN1-204ENST00000392903 CLIP1P30622 1438 aa22.7■■□□□ 1.22
SHTN1-204ENST00000392903 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
SHTN1-204ENST00000392903 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
SHTN1-204ENST00000392903 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
SHTN1-204ENST00000392903 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
SHTN1-204ENST00000392903 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
SHTN1-204ENST00000392903 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
SHTN1-204ENST00000392903 APLP2Q06481 763 aa22.51■■□□□ 1.19
SHTN1-204ENST00000392903 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
SHTN1-204ENST00000392903 CUX2O14529 1486 aa22.42■■□□□ 1.18
SHTN1-204ENST00000392903 HNRNPUL2Q1KMD3 747 aaKnown RBP22.41■■□□□ 1.18
SHTN1-204ENST00000392903 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
SHTN1-204ENST00000392903 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
SHTN1-204ENST00000392903 ZNF316A6NFI3 1004 aaPredicted RBP22.37■■□□□ 1.17
SHTN1-204ENST00000392903 IGF1RP08069 1367 aa22.35■■□□□ 1.17
SHTN1-204ENST00000392903 NESP48681 1621 aa22.35■■□□□ 1.17
SHTN1-204ENST00000392903 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
SHTN1-204ENST00000392903 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
SHTN1-204ENST00000392903 DNAJC5BQ9UF47 199 aa22.26■■□□□ 1.15
SHTN1-204ENST00000392903 CARMIL1Q5VZK9 1371 aa22.25■■□□□ 1.15
SHTN1-204ENST00000392903 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
SHTN1-204ENST00000392903 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
SHTN1-204ENST00000392903 YTHDC1Q96MU7 727 aaKnown RBP22.19■■□□□ 1.14
SHTN1-204ENST00000392903 TOPBP1Q92547 1522 aa22.18■■□□□ 1.14
SHTN1-204ENST00000392903 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
SHTN1-204ENST00000392903 POLA1P09884 1462 aaPredicted RBP22.16■■□□□ 1.14
SHTN1-204ENST00000392903 MIER1Q8N108 512 aa22.13■■□□□ 1.13
SHTN1-204ENST00000392903 P3H3Q8IVL6 736 aa22.1■■□□□ 1.13
SHTN1-204ENST00000392903 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
SHTN1-204ENST00000392903 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms