RNA–Protein interactions for RNA: ENST00000425700.3

C4B-201, Transcript of complement C4B (Chido blood group), humanhuman

TSL 1 (best) BASIC

Gene C4B, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4B-201ENST00000425700 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
C4B-201ENST00000425700 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
C4B-201ENST00000425700 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
C4B-201ENST00000425700 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
C4B-201ENST00000425700 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
C4B-201ENST00000425700 APLP2Q06481 763 aa22.12■■□□□ 1.13
C4B-201ENST00000425700 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
C4B-201ENST00000425700 ZEB1P37275 1124 aaPredicted RBP21.86■■□□□ 1.09
C4B-201ENST00000425700 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
C4B-201ENST00000425700 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
C4B-201ENST00000425700 FAM9AQ8IZU1 332 aaPredicted RBP21.7■■□□□ 1.06
C4B-201ENST00000425700 CCER1Q8TC90 406 aaPredicted RBP21.61■■□□□ 1.05
C4B-201ENST00000425700 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
C4B-201ENST00000425700 MYT1Q01538 1121 aa21.49■■□□□ 1.03
C4B-201ENST00000425700 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
C4B-201ENST00000425700 TTBK1Q5TCY1 1321 aaPredicted RBP21.32■■□□□ 1
C4B-201ENST00000425700 NEFLP07196 543 aa21.21■□□□□ 0.99
C4B-201ENST00000425700 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
C4B-201ENST00000425700 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
C4B-201ENST00000425700 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
C4B-201ENST00000425700 TRIM26Q12899 539 aaPredicted RBP21■□□□□ 0.95
C4B-201ENST00000425700 ATP1B4Q9UN42 357 aaPredicted RBP20.97■□□□□ 0.95
C4B-201ENST00000425700 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
C4B-201ENST00000425700 HRCP23327 699 aa20.86■□□□□ 0.93
C4B-201ENST00000425700 LOC105371045A0A1W2PR82 267 aa20.77■□□□□ 0.92
C4B-201ENST00000425700 PPARGC1BQ86YN6 1023 aaKnown RBP20.59■□□□□ 0.89
C4B-201ENST00000425700 DAXXQ9UER7 740 aaPredicted RBP20.57■□□□□ 0.88
C4B-201ENST00000425700 ZCCHC6Q5VYS8 1495 aaKnown RBP20.45■□□□□ 0.86
C4B-201ENST00000425700 ITGAEP38570 1179 aa20.33■□□□□ 0.84
C4B-201ENST00000425700 ABCC9O60706 1549 aa20.32■□□□□ 0.84
C4B-201ENST00000425700 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
C4B-201ENST00000425700 DIEXFQ68CQ4 756 aaKnown RBP20.26■□□□□ 0.83
C4B-201ENST00000425700 POLR3GLQ9BT43 218 aa20.24■□□□□ 0.83
C4B-201ENST00000425700 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
C4B-201ENST00000425700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.22■□□□□ 0.83
C4B-201ENST00000425700 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
C4B-201ENST00000425700 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
C4B-201ENST00000425700 ZNF316A6NFI3 1004 aaPredicted RBP20.07■□□□□ 0.8
C4B-201ENST00000425700 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
C4B-201ENST00000425700 CLSPNQ9HAW4 1339 aa19.97■□□□□ 0.79
C4B-201ENST00000425700 SCRIBQ14160 1630 aa19.95■□□□□ 0.78
C4B-201ENST00000425700 FAM50AQ14320 339 aaKnown RBP19.92■□□□□ 0.78
C4B-201ENST00000425700 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
C4B-201ENST00000425700 ANP32CO43423 234 aa19.89■□□□□ 0.77
C4B-201ENST00000425700 CNGB1Q14028 1251 aaPredicted RBP19.88■□□□□ 0.77
C4B-201ENST00000425700 GTF3C3Q9Y5Q9 886 aa19.86■□□□□ 0.77
C4B-201ENST00000425700 CDK11AQ9UQ88 783 aaPredicted RBP19.85■□□□□ 0.77
C4B-201ENST00000425700 TRIM52Q96A61 297 aa19.83■□□□□ 0.77
C4B-201ENST00000425700 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
C4B-201ENST00000425700 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
C4B-201ENST00000425700 NEUROD1Q13562 356 aa19.76■□□□□ 0.75
C4B-201ENST00000425700 CSRNP3Q8WYN3 585 aa19.75■□□□□ 0.75
C4B-201ENST00000425700 ACIN1Q9UKV3 1341 aaKnown RBP19.68■□□□□ 0.74
C4B-201ENST00000425700 BCANQ96GW7 911 aa19.66■□□□□ 0.74
C4B-201ENST00000425700 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
C4B-201ENST00000425700 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
C4B-201ENST00000425700 ANP32AP39687 249 aaKnown RBP19.54■□□□□ 0.72
C4B-201ENST00000425700 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
C4B-201ENST00000425700 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
C4B-201ENST00000425700 NEFMP07197 916 aa19.45■□□□□ 0.7
C4B-201ENST00000425700 NACADO15069 1562 aa19.38■□□□□ 0.69
C4B-201ENST00000425700 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
C4B-201ENST00000425700 TONSLQ96HA7 1378 aa19.31■□□□□ 0.68
C4B-201ENST00000425700 FKBP8Q14318 412 aa19.26■□□□□ 0.67
C4B-201ENST00000425700 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
C4B-201ENST00000425700 ANP32BQ92688 251 aaKnown RBP19.25■□□□□ 0.67
C4B-201ENST00000425700 EEA1Q15075 1411 aa19.23■□□□□ 0.67
C4B-201ENST00000425700 UPF2Q9HAU5 1272 aaKnown RBP19.21■□□□□ 0.67
C4B-201ENST00000425700 FBLN2P98095 1184 aa19.19■□□□□ 0.66
C4B-201ENST00000425700 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
C4B-201ENST00000425700 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
C4B-201ENST00000425700 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
C4B-201ENST00000425700 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
C4B-201ENST00000425700 CLIP1P30622 1438 aa19.17■□□□□ 0.66
C4B-201ENST00000425700 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
C4B-201ENST00000425700 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
C4B-201ENST00000425700 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.11■□□□□ 0.65
C4B-201ENST00000425700 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
C4B-201ENST00000425700 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
C4B-201ENST00000425700 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
C4B-201ENST00000425700 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
C4B-201ENST00000425700 HSP90AA1P07900 732 aaKnown RBP19.09■□□□□ 0.65
C4B-201ENST00000425700 DDX10Q13206 875 aaKnown RBP19.09■□□□□ 0.65
C4B-201ENST00000425700 GLIPR1L2Q4G1C9 344 aa19.06■□□□□ 0.64
C4B-201ENST00000425700 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
C4B-201ENST00000425700 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
C4B-201ENST00000425700 TMC1Q8TDI8 760 aa19.02■□□□□ 0.63
C4B-201ENST00000425700 BCL11AQ9H165 835 aa19.01■□□□□ 0.63
C4B-201ENST00000425700 MROH2BQ7Z745 1585 aa19.01■□□□□ 0.63
C4B-201ENST00000425700 ARID3CA6NKF2 412 aa19■□□□□ 0.63
C4B-201ENST00000425700 EIF5BO60841 1220 aaKnown RBP18.98■□□□□ 0.63
C4B-201ENST00000425700 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
C4B-201ENST00000425700 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
C4B-201ENST00000425700 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
C4B-201ENST00000425700 MRS2Q9HD23 443 aa18.93■□□□□ 0.62
C4B-201ENST00000425700 WDR43Q15061 677 aaKnown RBP eCLIP18.93■□□□□ 0.62
C4B-201ENST00000425700 MIER1Q8N108 512 aa18.91■□□□□ 0.62
C4B-201ENST00000425700 ESF1Q9H501 851 aaKnown RBP18.9■□□□□ 0.62
C4B-201ENST00000425700 SOGA1O94964 1423 aa18.89■□□□□ 0.61
C4B-201ENST00000425700 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms