RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
SLC6A20-202ENST00000358525 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
SLC6A20-202ENST00000358525 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
SLC6A20-202ENST00000358525 SHROOM4Q9ULL8 1493 aa24.56■■□□□ 1.52
SLC6A20-202ENST00000358525 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
SLC6A20-202ENST00000358525 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
SLC6A20-202ENST00000358525 PCGF6Q9BYE7 350 aa23.12■■□□□ 1.29
SLC6A20-202ENST00000358525 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
SLC6A20-202ENST00000358525 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
SLC6A20-202ENST00000358525 APLP2Q06481 763 aa22.85■■□□□ 1.25
SLC6A20-202ENST00000358525 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
SLC6A20-202ENST00000358525 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
SLC6A20-202ENST00000358525 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
SLC6A20-202ENST00000358525 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
SLC6A20-202ENST00000358525 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
SLC6A20-202ENST00000358525 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
SLC6A20-202ENST00000358525 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
SLC6A20-202ENST00000358525 PELP1Q8IZL8 1130 aaKnown RBP22.29■■□□□ 1.16
SLC6A20-202ENST00000358525 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
SLC6A20-202ENST00000358525 HRCP23327 699 aa22.16■■□□□ 1.14
SLC6A20-202ENST00000358525 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
SLC6A20-202ENST00000358525 CENPBP07199 599 aaPredicted RBP22.11■■□□□ 1.13
SLC6A20-202ENST00000358525 ABCC9O60706 1549 aa21.88■■□□□ 1.09
SLC6A20-202ENST00000358525 YTHDC1Q96MU7 727 aaKnown RBP21.86■■□□□ 1.09
SLC6A20-202ENST00000358525 HNRNPUL2Q1KMD3 747 aaKnown RBP21.68■■□□□ 1.06
SLC6A20-202ENST00000358525 ITGAEP38570 1179 aa21.66■■□□□ 1.06
SLC6A20-202ENST00000358525 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
SLC6A20-202ENST00000358525 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
SLC6A20-202ENST00000358525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
SLC6A20-202ENST00000358525 NEFLP07196 543 aa21.44■■□□□ 1.02
SLC6A20-202ENST00000358525 ERICH6Q7L0X2 663 aa21.39■■□□□ 1.01
SLC6A20-202ENST00000358525 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
SLC6A20-202ENST00000358525 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
SLC6A20-202ENST00000358525 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
SLC6A20-202ENST00000358525 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
SLC6A20-202ENST00000358525 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.97
SLC6A20-202ENST00000358525 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
SLC6A20-202ENST00000358525 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
SLC6A20-202ENST00000358525 CNGB1Q14028 1251 aaPredicted RBP21.02■□□□□ 0.96
SLC6A20-202ENST00000358525 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
SLC6A20-202ENST00000358525 NEUROD1Q13562 356 aa20.99■□□□□ 0.95
SLC6A20-202ENST00000358525 MYT1LQ9UL68 1186 aa20.97■□□□□ 0.95
SLC6A20-202ENST00000358525 ZNF316A6NFI3 1004 aaPredicted RBP20.9■□□□□ 0.94
SLC6A20-202ENST00000358525 TRIM52Q96A61 297 aa20.9■□□□□ 0.94
SLC6A20-202ENST00000358525 MYT1Q01538 1121 aa20.88■□□□□ 0.93
SLC6A20-202ENST00000358525 GTF3C3Q9Y5Q9 886 aa20.86■□□□□ 0.93
SLC6A20-202ENST00000358525 P3H3Q8IVL6 736 aa20.86■□□□□ 0.93
SLC6A20-202ENST00000358525 RSF1Q96T23 1441 aaPredicted RBP20.82■□□□□ 0.92
SLC6A20-202ENST00000358525 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
SLC6A20-202ENST00000358525 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
SLC6A20-202ENST00000358525 FBLN2P98095 1184 aa20.66■□□□□ 0.9
SLC6A20-202ENST00000358525 ANP32CO43423 234 aa20.65■□□□□ 0.9
SLC6A20-202ENST00000358525 BCANQ96GW7 911 aa20.65■□□□□ 0.9
SLC6A20-202ENST00000358525 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
SLC6A20-202ENST00000358525 ZNF326Q5BKZ1 582 aaKnown RBP20.62■□□□□ 0.89
SLC6A20-202ENST00000358525 NACADO15069 1562 aa20.55■□□□□ 0.88
SLC6A20-202ENST00000358525 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
SLC6A20-202ENST00000358525 DAXXQ9UER7 740 aaPredicted RBP20.54■□□□□ 0.88
SLC6A20-202ENST00000358525 CLIP1P30622 1438 aa20.48■□□□□ 0.87
SLC6A20-202ENST00000358525 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
SLC6A20-202ENST00000358525 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
SLC6A20-202ENST00000358525 ZNF777Q9ULD5 760 aaPredicted RBP20.42■□□□□ 0.86
SLC6A20-202ENST00000358525 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
SLC6A20-202ENST00000358525 EEA1Q15075 1411 aa20.38■□□□□ 0.85
SLC6A20-202ENST00000358525 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
SLC6A20-202ENST00000358525 TONSLQ96HA7 1378 aa20.35■□□□□ 0.85
SLC6A20-202ENST00000358525 CDK11AQ9UQ88 783 aaPredicted RBP20.32■□□□□ 0.84
SLC6A20-202ENST00000358525 DDX10Q13206 875 aaKnown RBP20.3■□□□□ 0.84
SLC6A20-202ENST00000358525 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
SLC6A20-202ENST00000358525 BAZ1BQ9UIG0 1483 aaKnown RBP20.29■□□□□ 0.84
SLC6A20-202ENST00000358525 TNIKQ9UKE5 1360 aa20.28■□□□□ 0.84
SLC6A20-202ENST00000358525 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
SLC6A20-202ENST00000358525 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
SLC6A20-202ENST00000358525 MIER1Q8N108 512 aa20.24■□□□□ 0.83
SLC6A20-202ENST00000358525 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
SLC6A20-202ENST00000358525 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
SLC6A20-202ENST00000358525 CEP164Q9UPV0 1460 aa20.2■□□□□ 0.82
SLC6A20-202ENST00000358525 MTUS2Q5JR59 1369 aa20.19■□□□□ 0.82
SLC6A20-202ENST00000358525 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
SLC6A20-202ENST00000358525 FKBP8Q14318 412 aa20.18■□□□□ 0.82
SLC6A20-202ENST00000358525 SOGA1O94964 1423 aa20.15■□□□□ 0.82
SLC6A20-202ENST00000358525 HNRNPUQ00839 825 aaKnown RBP eCLIP20.12■□□□□ 0.81
SLC6A20-202ENST00000358525 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
SLC6A20-202ENST00000358525 KIF27Q86VH2 1401 aa20.11■□□□□ 0.81
SLC6A20-202ENST00000358525 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
SLC6A20-202ENST00000358525 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
SLC6A20-202ENST00000358525 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
SLC6A20-202ENST00000358525 RRP7BPQ9NSQ0 103 aa20.03■□□□□ 0.8
SLC6A20-202ENST00000358525 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
SLC6A20-202ENST00000358525 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
SLC6A20-202ENST00000358525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.79
SLC6A20-202ENST00000358525 WIZO95785 1651 aa19.96■□□□□ 0.79
SLC6A20-202ENST00000358525 KDM2AQ9Y2K7 1162 aa19.92■□□□□ 0.78
SLC6A20-202ENST00000358525 TSPY4P0CV99 314 aa19.92■□□□□ 0.78
SLC6A20-202ENST00000358525 TSPY10P0CW01 314 aa19.92■□□□□ 0.78
SLC6A20-202ENST00000358525 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
SLC6A20-202ENST00000358525 SALL2Q9Y467 1007 aaPredicted RBP19.9■□□□□ 0.78
SLC6A20-202ENST00000358525 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
SLC6A20-202ENST00000358525 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
SLC6A20-202ENST00000358525 ANP32AP39687 249 aaKnown RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms