Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
SCAPQ12770 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
SCAPQ12770 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 ME2P1-201ENST00000426028 1970 ntBASIC17.22■□□□□ 0.35
SCAPQ12770 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SCAPQ12770 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.21■□□□□ 0.35
SCAPQ12770 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAPQ12770 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAPQ12770 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SCAPQ12770 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 MCCD1P2-201ENST00000423228 335 ntBASIC17.21■□□□□ 0.35
SCAPQ12770 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.21■□□□□ 0.35
SCAPQ12770 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.21■□□□□ 0.35
SCAPQ12770 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.21■□□□□ 0.35
SCAPQ12770 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SCAPQ12770 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.21■□□□□ 0.35
SCAPQ12770 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 AL118508.1-201ENST00000613502 2345 ntBASIC17.21■□□□□ 0.35
SCAPQ12770 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
SCAPQ12770 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SCAPQ12770 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCAPQ12770 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCAPQ12770 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SCAPQ12770 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SCAPQ12770 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.2■□□□□ 0.34
SCAPQ12770 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 YBX1P5-201ENST00000509441 847 ntBASIC17.2■□□□□ 0.34
SCAPQ12770 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.2■□□□□ 0.34
SCAPQ12770 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SCAPQ12770 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.2■□□□□ 0.34
SCAPQ12770 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SCAPQ12770 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SCAPQ12770 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
SCAPQ12770 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SCAPQ12770 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 PCGF3-213ENST00000620529 1899 ntBASIC17.19■□□□□ 0.34
SCAPQ12770 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 AC002056.1-201ENST00000395613 760 ntBASIC17.19■□□□□ 0.34
SCAPQ12770 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 CNN2P11-201ENST00000429351 262 ntBASIC17.19■□□□□ 0.34
SCAPQ12770 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SCAPQ12770 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms