RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
NR1H3-204ENST00000407404 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.34
NR1H3-204ENST00000407404 ABCC9O60706 1549 aa35.11■■■■□ 3.21
NR1H3-204ENST00000407404 DCAF8L2P0C7V8 631 aa33.81■■■■□ 3
NR1H3-204ENST00000407404 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
NR1H3-204ENST00000407404 NACADO15069 1562 aa33.78■■■■□ 3
NR1H3-204ENST00000407404 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.98
NR1H3-204ENST00000407404 MYO15BQ96JP2 1530 aa33.59■■■□□ 2.97
NR1H3-204ENST00000407404 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
NR1H3-204ENST00000407404 UNC13AQ9UPW8 1703 aa33.03■■■□□ 2.88
NR1H3-204ENST00000407404 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
NR1H3-204ENST00000407404 SCRIBQ14160 1630 aa32.8■■■□□ 2.84
NR1H3-204ENST00000407404 BICRAQ9NZM4 1560 aa32.76■■■□□ 2.83
NR1H3-204ENST00000407404 SHROOM4Q9ULL8 1493 aa32.42■■■□□ 2.78
NR1H3-204ENST00000407404 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
NR1H3-204ENST00000407404 EIF4G1Q04637 1599 aaKnown RBP31.9■■■□□ 2.7
NR1H3-204ENST00000407404 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
NR1H3-204ENST00000407404 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
NR1H3-204ENST00000407404 SMARCA4P51532 1647 aa31.38■■■□□ 2.61
NR1H3-204ENST00000407404 BAZ1AQ9NRL2 1556 aaPredicted RBP31.35■■■□□ 2.61
NR1H3-204ENST00000407404 ATAD2BQ9ULI0 1458 aa31.18■■■□□ 2.58
NR1H3-204ENST00000407404 MROH2BQ7Z745 1585 aa31.17■■■□□ 2.58
NR1H3-204ENST00000407404 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
NR1H3-204ENST00000407404 NCAPD3P42695 1498 aa31.16■■■□□ 2.58
NR1H3-204ENST00000407404 PEG3Q9GZU2 1588 aa31.07■■■□□ 2.56
NR1H3-204ENST00000407404 HMGXB3Q12766 1538 aa31.01■■■□□ 2.56
NR1H3-204ENST00000407404 BAZ1BQ9UIG0 1483 aaKnown RBP30.95■■■□□ 2.55
NR1H3-204ENST00000407404 WIZO95785 1651 aa30.85■■■□□ 2.53
NR1H3-204ENST00000407404 RSF1Q96T23 1441 aaPredicted RBP30.84■■■□□ 2.53
NR1H3-204ENST00000407404 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
NR1H3-204ENST00000407404 NESP48681 1621 aa30.39■■■□□ 2.46
NR1H3-204ENST00000407404 LAMC3Q9Y6N6 1575 aa30.34■■■□□ 2.45
NR1H3-204ENST00000407404 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
NR1H3-204ENST00000407404 ERCC6Q03468 1493 aa30.26■■■□□ 2.43
NR1H3-204ENST00000407404 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
NR1H3-204ENST00000407404 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.42
NR1H3-204ENST00000407404 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
NR1H3-204ENST00000407404 CFTRP13569 1480 aa30.09■■■□□ 2.41
NR1H3-204ENST00000407404 KIF21AQ7Z4S6 1674 aa30.05■■■□□ 2.4
NR1H3-204ENST00000407404 THOC2Q8NI27 1593 aaKnown RBP29.91■■■□□ 2.38
NR1H3-204ENST00000407404 CUX2O14529 1486 aa29.91■■■□□ 2.38
NR1H3-204ENST00000407404 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
NR1H3-204ENST00000407404 PRDM2Q13029 1718 aa29.89■■■□□ 2.37
NR1H3-204ENST00000407404 CEP164Q9UPV0 1460 aa29.88■■■□□ 2.37
NR1H3-204ENST00000407404 MRC2Q9UBG0 1479 aa29.82■■■□□ 2.36
NR1H3-204ENST00000407404 WDR62O43379 1518 aa29.71■■■□□ 2.35
NR1H3-204ENST00000407404 URB2Q14146 1524 aaKnown RBP29.61■■■□□ 2.33
NR1H3-204ENST00000407404 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
NR1H3-204ENST00000407404 TOPBP1Q92547 1522 aa29.45■■■□□ 2.3
NR1H3-204ENST00000407404 DNMBPQ6XZF7 1577 aa29.42■■■□□ 2.3
NR1H3-204ENST00000407404 IFT140Q96RY7 1462 aa29.25■■■□□ 2.27
NR1H3-204ENST00000407404 CUX1P39880 1505 aa29.24■■■□□ 2.27
NR1H3-204ENST00000407404 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
NR1H3-204ENST00000407404 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.25
NR1H3-204ENST00000407404 TARBP1Q13395 1621 aaKnown RBP29.11■■■□□ 2.25
NR1H3-204ENST00000407404 SOGA1O94964 1423 aa29.09■■■□□ 2.25
NR1H3-204ENST00000407404 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
NR1H3-204ENST00000407404 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
NR1H3-204ENST00000407404 RAD54L2Q9Y4B4 1467 aa29.07■■■□□ 2.24
NR1H3-204ENST00000407404 TOP2BQ02880 1626 aa29.01■■■□□ 2.24
NR1H3-204ENST00000407404 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.24
NR1H3-204ENST00000407404 SYNJ1O43426 1573 aa29■■■□□ 2.23
NR1H3-204ENST00000407404 EIF4G3O43432 1585 aaKnown RBP28.99■■■□□ 2.23
NR1H3-204ENST00000407404 AQRO60306 1485 aaKnown RBP eCLIP28.95■■■□□ 2.229e-8■■■■□ 21.2
NR1H3-204ENST00000407404 DNAJC5Q9H3Z4 198 aa28.93■■■□□ 2.22
NR1H3-204ENST00000407404 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
NR1H3-204ENST00000407404 WDR97A6NE52 1622 aa28.89■■■□□ 2.22
NR1H3-204ENST00000407404 ABCA10Q8WWZ4 1543 aa28.86■■■□□ 2.21
NR1H3-204ENST00000407404 GAPVD1Q14C86 1478 aa28.75■■■□□ 2.19
NR1H3-204ENST00000407404 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
NR1H3-204ENST00000407404 ABCA5Q8WWZ7 1642 aa28.73■■■□□ 2.19
NR1H3-204ENST00000407404 OSCARQ8IYS5 282 aa28.7■■■□□ 2.19
NR1H3-204ENST00000407404 PBRM1Q86U86 1689 aa28.69■■■□□ 2.18
NR1H3-204ENST00000407404 SNAPC4Q5SXM2 1469 aa28.68■■■□□ 2.18
NR1H3-204ENST00000407404 MAGI1Q96QZ7 1491 aaPredicted RBP28.65■■■□□ 2.18
NR1H3-204ENST00000407404 CHD1O14646 1710 aa28.63■■■□□ 2.17
NR1H3-204ENST00000407404 FBLN2P98095 1184 aa28.62■■■□□ 2.17
NR1H3-204ENST00000407404 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
NR1H3-204ENST00000407404 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
NR1H3-204ENST00000407404 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
NR1H3-204ENST00000407404 KIF27Q86VH2 1401 aa28.49■■■□□ 2.15
NR1H3-204ENST00000407404 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
NR1H3-204ENST00000407404 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
NR1H3-204ENST00000407404 FHAD1B1AJZ9 1412 aa28.42■■■□□ 2.14
NR1H3-204ENST00000407404 GRIN2AQ12879 1464 aa28.36■■■□□ 2.13
NR1H3-204ENST00000407404 IGF1RP08069 1367 aa28.35■■■□□ 2.13
NR1H3-204ENST00000407404 CLASP1Q7Z460 1538 aa28.3■■■□□ 2.12
NR1H3-204ENST00000407404 CUL7Q14999 1698 aa28.28■■■□□ 2.12
NR1H3-204ENST00000407404 NUP160Q12769 1436 aa28.23■■■□□ 2.11
NR1H3-204ENST00000407404 RUSC2Q8N2Y8 1516 aa28.23■■■□□ 2.11
NR1H3-204ENST00000407404 RIMBP3CA6NJZ7 1639 aa28.21■■■□□ 2.11
NR1H3-204ENST00000407404 RIMBP3BA6NNM3 1639 aa28.21■■■□□ 2.11
NR1H3-204ENST00000407404 RIMBP3Q9UFD9 1639 aa28.21■■■□□ 2.11
NR1H3-204ENST00000407404 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
NR1H3-204ENST00000407404 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
NR1H3-204ENST00000407404 CARMIL1Q5VZK9 1371 aa28.2■■■□□ 2.1
NR1H3-204ENST00000407404 CHIC1Q5VXU3 224 aa28.16■■■□□ 2.1
NR1H3-204ENST00000407404 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
NR1H3-204ENST00000407404 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
NR1H3-204ENST00000407404 KIAA0586Q9BVV6 1533 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms