RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
CNTNAP3-204ENST00000377656 NISCHQ9Y2I1 1504 aa30.07■■■□□ 2.4
CNTNAP3-204ENST00000377656 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
CNTNAP3-204ENST00000377656 SHROOM4Q9ULL8 1493 aa28.89■■■□□ 2.22
CNTNAP3-204ENST00000377656 EHMT2Q96KQ7 1210 aa28.42■■■□□ 2.14
CNTNAP3-204ENST00000377656 APLP2Q06481 763 aa28.04■■■□□ 2.08
CNTNAP3-204ENST00000377656 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
CNTNAP3-204ENST00000377656 PELP1Q8IZL8 1130 aaKnown RBP27.75■■■□□ 2.03
CNTNAP3-204ENST00000377656 TTBK1Q5TCY1 1321 aaPredicted RBP27.46■■□□□ 1.99
CNTNAP3-204ENST00000377656 PCGF6Q9BYE7 350 aa27.42■■□□□ 1.98
CNTNAP3-204ENST00000377656 TRIM41Q8WV44 630 aa27.32■■□□□ 1.96
CNTNAP3-204ENST00000377656 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
CNTNAP3-204ENST00000377656 ATP1B4Q9UN42 357 aaPredicted RBP27.04■■□□□ 1.92
CNTNAP3-204ENST00000377656 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
CNTNAP3-204ENST00000377656 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.92
CNTNAP3-204ENST00000377656 CCER1Q8TC90 406 aaPredicted RBP27■■□□□ 1.91
CNTNAP3-204ENST00000377656 CENPBP07199 599 aaPredicted RBP26.87■■□□□ 1.89
CNTNAP3-204ENST00000377656 ERICH6Q7L0X2 663 aa26.5■■□□□ 1.83
CNTNAP3-204ENST00000377656 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
CNTNAP3-204ENST00000377656 NEFLP07196 543 aa26.35■■□□□ 1.81
CNTNAP3-204ENST00000377656 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
CNTNAP3-204ENST00000377656 YTHDC1Q96MU7 727 aaKnown RBP26.27■■□□□ 1.8
CNTNAP3-204ENST00000377656 HRCP23327 699 aa26.27■■□□□ 1.8
CNTNAP3-204ENST00000377656 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
CNTNAP3-204ENST00000377656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
CNTNAP3-204ENST00000377656 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
CNTNAP3-204ENST00000377656 ITGAEP38570 1179 aa26.12■■□□□ 1.77
CNTNAP3-204ENST00000377656 LOC105371045A0A1W2PR82 267 aa26.07■■□□□ 1.76
CNTNAP3-204ENST00000377656 MYT1LQ9UL68 1186 aa26.02■■□□□ 1.76
CNTNAP3-204ENST00000377656 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
CNTNAP3-204ENST00000377656 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.69
CNTNAP3-204ENST00000377656 ABCC9O60706 1549 aa25.59■■□□□ 1.69
CNTNAP3-204ENST00000377656 CNGB1Q14028 1251 aaPredicted RBP25.58■■□□□ 1.69
CNTNAP3-204ENST00000377656 DAXXQ9UER7 740 aaPredicted RBP25.54■■□□□ 1.68
CNTNAP3-204ENST00000377656 MYT1Q01538 1121 aa25.51■■□□□ 1.67
CNTNAP3-204ENST00000377656 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
CNTNAP3-204ENST00000377656 SLC4A1APQ9BWU0 796 aaKnown RBP25.38■■□□□ 1.65
CNTNAP3-204ENST00000377656 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
CNTNAP3-204ENST00000377656 TRIM52Q96A61 297 aa25.33■■□□□ 1.65
CNTNAP3-204ENST00000377656 NEUROD1Q13562 356 aa25.2■■□□□ 1.62
CNTNAP3-204ENST00000377656 FBLN2P98095 1184 aa25.11■■□□□ 1.61
CNTNAP3-204ENST00000377656 CLSPNQ9HAW4 1339 aa25.09■■□□□ 1.61
CNTNAP3-204ENST00000377656 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
CNTNAP3-204ENST00000377656 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
CNTNAP3-204ENST00000377656 CSRNP3Q8WYN3 585 aa24.98■■□□□ 1.59
CNTNAP3-204ENST00000377656 ANP32CO43423 234 aa24.95■■□□□ 1.58
CNTNAP3-204ENST00000377656 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
CNTNAP3-204ENST00000377656 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
CNTNAP3-204ENST00000377656 RTL5Q5HYW3 569 aaPredicted RBP24.88■■□□□ 1.57
CNTNAP3-204ENST00000377656 DCAF1Q9Y4B6 1507 aa24.86■■□□□ 1.57
CNTNAP3-204ENST00000377656 ARID3CA6NKF2 412 aa24.8■■□□□ 1.56
CNTNAP3-204ENST00000377656 BCANQ96GW7 911 aa24.74■■□□□ 1.55
CNTNAP3-204ENST00000377656 CDK11AQ9UQ88 783 aaPredicted RBP24.71■■□□□ 1.55
CNTNAP3-204ENST00000377656 GTF3C3Q9Y5Q9 886 aa24.7■■□□□ 1.54
CNTNAP3-204ENST00000377656 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
CNTNAP3-204ENST00000377656 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
CNTNAP3-204ENST00000377656 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
CNTNAP3-204ENST00000377656 SCRIBQ14160 1630 aa24.6■■□□□ 1.53
CNTNAP3-204ENST00000377656 NEFMP07197 916 aa24.58■■□□□ 1.52
CNTNAP3-204ENST00000377656 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
CNTNAP3-204ENST00000377656 CANXP27824 592 aaKnown RBP24.54■■□□□ 1.52
CNTNAP3-204ENST00000377656 SLC24A1O60721 1099 aa24.49■■□□□ 1.51
CNTNAP3-204ENST00000377656 TONSLQ96HA7 1378 aa24.41■■□□□ 1.5
CNTNAP3-204ENST00000377656 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
CNTNAP3-204ENST00000377656 BCL11AQ9H165 835 aa24.39■■□□□ 1.49
CNTNAP3-204ENST00000377656 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
CNTNAP3-204ENST00000377656 NPM1P06748 294 aaKnown RBP eCLIP24.32■■□□□ 1.48
CNTNAP3-204ENST00000377656 CHGAP10645 457 aaKnown RBP24.31■■□□□ 1.48
CNTNAP3-204ENST00000377656 STAG3Q9UJ98 1225 aa24.26■■□□□ 1.47
CNTNAP3-204ENST00000377656 CHIC2Q9UKJ5 165 aa24.22■■□□□ 1.47
CNTNAP3-204ENST00000377656 DDX10Q13206 875 aaKnown RBP24.2■■□□□ 1.46
CNTNAP3-204ENST00000377656 ANP32AP39687 249 aaKnown RBP24.2■■□□□ 1.46
CNTNAP3-204ENST00000377656 HNRNPUQ00839 825 aaKnown RBP eCLIP24.16■■□□□ 1.46
CNTNAP3-204ENST00000377656 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
CNTNAP3-204ENST00000377656 TSPY4P0CV99 314 aa24.16■■□□□ 1.46
CNTNAP3-204ENST00000377656 TSPY10P0CW01 314 aa24.16■■□□□ 1.46
CNTNAP3-204ENST00000377656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
CNTNAP3-204ENST00000377656 FAM9BQ8IZU0 186 aa24.12■■□□□ 1.45
CNTNAP3-204ENST00000377656 MTUS2Q5JR59 1369 aa24.12■■□□□ 1.45
CNTNAP3-204ENST00000377656 FKBP8Q14318 412 aa24.1■■□□□ 1.45
CNTNAP3-204ENST00000377656 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
CNTNAP3-204ENST00000377656 NPM2Q86SE8 214 aaKnown RBP24.06■■□□□ 1.44
CNTNAP3-204ENST00000377656 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
CNTNAP3-204ENST00000377656 PLPPR3Q6T4P5 718 aa24.03■■□□□ 1.44
CNTNAP3-204ENST00000377656 CLIP1P30622 1438 aa24.02■■□□□ 1.44
CNTNAP3-204ENST00000377656 SALL2Q9Y467 1007 aaPredicted RBP24.01■■□□□ 1.43
CNTNAP3-204ENST00000377656 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
CNTNAP3-204ENST00000377656 EEA1Q15075 1411 aa23.96■■□□□ 1.43
CNTNAP3-204ENST00000377656 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
CNTNAP3-204ENST00000377656 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
CNTNAP3-204ENST00000377656 MRS2Q9HD23 443 aa23.92■■□□□ 1.42
CNTNAP3-204ENST00000377656 HSP90AA1P07900 732 aaKnown RBP23.9■■□□□ 1.42
CNTNAP3-204ENST00000377656 WDR43Q15061 677 aaKnown RBP eCLIP23.9■■□□□ 1.42
CNTNAP3-204ENST00000377656 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.88■■□□□ 1.41
CNTNAP3-204ENST00000377656 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
CNTNAP3-204ENST00000377656 CCDC136Q96JN2 1154 aa23.86■■□□□ 1.41
CNTNAP3-204ENST00000377656 RRP7BPQ9NSQ0 103 aa23.85■■□□□ 1.41
CNTNAP3-204ENST00000377656 RB1CC1Q8TDY2 1594 aa23.85■■□□□ 1.41
CNTNAP3-204ENST00000377656 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
CNTNAP3-204ENST00000377656 GOLGA3Q08378 1498 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms