RNA–Protein interactions for RNA: ENST00000310981.5

SFT2D3-201, Transcript of SFT2 domain containing 3, humanhuman

APPRIS P1 BASIC

Gene SFT2D3, Length 3,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3-201ENST00000310981 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
SFT2D3-201ENST00000310981 DCAF8L2P0C7V8 631 aa31.11■■■□□ 2.57
SFT2D3-201ENST00000310981 SHROOM4Q9ULL8 1493 aa30.78■■■□□ 2.52
SFT2D3-201ENST00000310981 SUPT5HO00267 1087 aaKnown RBP30.39■■■□□ 2.46
SFT2D3-201ENST00000310981 EHMT2Q96KQ7 1210 aa28.94■■■□□ 2.22
SFT2D3-201ENST00000310981 FAM9AQ8IZU1 332 aaPredicted RBP28.46■■■□□ 2.15
SFT2D3-201ENST00000310981 CHIC1Q5VXU3 224 aa28.26■■■□□ 2.11
SFT2D3-201ENST00000310981 PCGF6Q9BYE7 350 aa28.23■■■□□ 2.11
SFT2D3-201ENST00000310981 LOC105371045A0A1W2PR82 267 aa28.13■■■□□ 2.09
SFT2D3-201ENST00000310981 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
SFT2D3-201ENST00000310981 ABCC9O60706 1549 aa27.98■■■□□ 2.07
SFT2D3-201ENST00000310981 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
SFT2D3-201ENST00000310981 TTBK1Q5TCY1 1321 aaPredicted RBP27.83■■■□□ 2.05
SFT2D3-201ENST00000310981 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
SFT2D3-201ENST00000310981 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
SFT2D3-201ENST00000310981 MYO15BQ96JP2 1530 aa27.49■■□□□ 1.99
SFT2D3-201ENST00000310981 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
SFT2D3-201ENST00000310981 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
SFT2D3-201ENST00000310981 RANGAP1P46060 587 aaPredicted RBP27.39■■□□□ 1.98
SFT2D3-201ENST00000310981 HRCP23327 699 aa27.19■■□□□ 1.94
SFT2D3-201ENST00000310981 UBTFP17480 764 aaKnown RBP27.01■■□□□ 1.91
SFT2D3-201ENST00000310981 TRIM26Q12899 539 aaPredicted RBP26.98■■□□□ 1.91
SFT2D3-201ENST00000310981 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
SFT2D3-201ENST00000310981 CECR2Q9BXF3 1484 aa26.77■■□□□ 1.88
SFT2D3-201ENST00000310981 CCER1Q8TC90 406 aaPredicted RBP26.73■■□□□ 1.87
SFT2D3-201ENST00000310981 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
SFT2D3-201ENST00000310981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.62■■□□□ 1.85
SFT2D3-201ENST00000310981 APLP2Q06481 763 aa26.57■■□□□ 1.84
SFT2D3-201ENST00000310981 RB1CC1Q8TDY2 1594 aa26.48■■□□□ 1.83
SFT2D3-201ENST00000310981 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
SFT2D3-201ENST00000310981 HNRNPUL2Q1KMD3 747 aaKnown RBP26.38■■□□□ 1.81
SFT2D3-201ENST00000310981 ATP1B4Q9UN42 357 aaPredicted RBP26.35■■□□□ 1.81
SFT2D3-201ENST00000310981 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
SFT2D3-201ENST00000310981 NACADO15069 1562 aa26.28■■□□□ 1.8
SFT2D3-201ENST00000310981 ITGAEP38570 1179 aa26.19■■□□□ 1.78
SFT2D3-201ENST00000310981 CSRNP3Q8WYN3 585 aa26.16■■□□□ 1.78
SFT2D3-201ENST00000310981 WIZO95785 1651 aa26.14■■□□□ 1.77
SFT2D3-201ENST00000310981 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
SFT2D3-201ENST00000310981 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
SFT2D3-201ENST00000310981 SOGA1O94964 1423 aa25.9■■□□□ 1.74
SFT2D3-201ENST00000310981 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
SFT2D3-201ENST00000310981 CCDC88BA6NC98 1476 aa25.84■■□□□ 1.73
SFT2D3-201ENST00000310981 P3H3Q8IVL6 736 aa25.79■■□□□ 1.72
SFT2D3-201ENST00000310981 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
SFT2D3-201ENST00000310981 DIEXFQ68CQ4 756 aaKnown RBP25.67■■□□□ 1.7
SFT2D3-201ENST00000310981 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
SFT2D3-201ENST00000310981 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
SFT2D3-201ENST00000310981 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
SFT2D3-201ENST00000310981 FAM50AQ14320 339 aaKnown RBP25.49■■□□□ 1.67
SFT2D3-201ENST00000310981 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
SFT2D3-201ENST00000310981 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
SFT2D3-201ENST00000310981 CENPBP07199 599 aaPredicted RBP25.48■■□□□ 1.67
SFT2D3-201ENST00000310981 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
SFT2D3-201ENST00000310981 CLIP1P30622 1438 aa25.44■■□□□ 1.66
SFT2D3-201ENST00000310981 TNIKQ9UKE5 1360 aa25.37■■□□□ 1.65
SFT2D3-201ENST00000310981 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
SFT2D3-201ENST00000310981 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
SFT2D3-201ENST00000310981 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
SFT2D3-201ENST00000310981 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
SFT2D3-201ENST00000310981 ZNF316A6NFI3 1004 aaPredicted RBP25.25■■□□□ 1.63
SFT2D3-201ENST00000310981 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
SFT2D3-201ENST00000310981 EEA1Q15075 1411 aa25.17■■□□□ 1.62
SFT2D3-201ENST00000310981 CNGB1Q14028 1251 aaPredicted RBP25.16■■□□□ 1.62
SFT2D3-201ENST00000310981 SCAF1Q9H7N4 1312 aaKnown RBP25.15■■□□□ 1.62
SFT2D3-201ENST00000310981 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.62
SFT2D3-201ENST00000310981 KANK4Q5T7N3 995 aaPredicted RBP25.14■■□□□ 1.62
SFT2D3-201ENST00000310981 RAPGEF2Q9Y4G8 1499 aa25.11■■□□□ 1.61
SFT2D3-201ENST00000310981 FBLN2P98095 1184 aa25.07■■□□□ 1.6
SFT2D3-201ENST00000310981 HIRIP3Q9BW71 556 aaPredicted RBP25.01■■□□□ 1.59
SFT2D3-201ENST00000310981 MIER1Q8N108 512 aa25.01■■□□□ 1.59
SFT2D3-201ENST00000310981 ACIN1Q9UKV3 1341 aaKnown RBP25■■□□□ 1.59
SFT2D3-201ENST00000310981 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
SFT2D3-201ENST00000310981 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
SFT2D3-201ENST00000310981 CUX2O14529 1486 aa24.93■■□□□ 1.58
SFT2D3-201ENST00000310981 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
SFT2D3-201ENST00000310981 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
SFT2D3-201ENST00000310981 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
SFT2D3-201ENST00000310981 POLR3GLQ9BT43 218 aa24.9■■□□□ 1.58
SFT2D3-201ENST00000310981 VPS8Q8N3P4 1428 aa24.88■■□□□ 1.57
SFT2D3-201ENST00000310981 CHIC2Q9UKJ5 165 aa24.88■■□□□ 1.57
SFT2D3-201ENST00000310981 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
SFT2D3-201ENST00000310981 SIN3AQ96ST3 1273 aa24.76■■□□□ 1.55
SFT2D3-201ENST00000310981 PELP1Q8IZL8 1130 aaKnown RBP24.73■■□□□ 1.55
SFT2D3-201ENST00000310981 DNAJC5BQ9UF47 199 aa24.73■■□□□ 1.55
SFT2D3-201ENST00000310981 BCANQ96GW7 911 aa24.72■■□□□ 1.55
SFT2D3-201ENST00000310981 DDX10Q13206 875 aaKnown RBP24.72■■□□□ 1.55
SFT2D3-201ENST00000310981 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
SFT2D3-201ENST00000310981 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
SFT2D3-201ENST00000310981 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
SFT2D3-201ENST00000310981 ZNF326Q5BKZ1 582 aaKnown RBP24.66■■□□□ 1.54
SFT2D3-201ENST00000310981 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
SFT2D3-201ENST00000310981 RRP7BPQ9NSQ0 103 aa24.64■■□□□ 1.54
SFT2D3-201ENST00000310981 MTUS2Q5JR59 1369 aa24.61■■□□□ 1.53
SFT2D3-201ENST00000310981 CCNB3Q8WWL7 1395 aa24.58■■□□□ 1.53
SFT2D3-201ENST00000310981 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
SFT2D3-201ENST00000310981 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
SFT2D3-201ENST00000310981 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
SFT2D3-201ENST00000310981 KIF21BO75037 1637 aa24.52■■□□□ 1.52
SFT2D3-201ENST00000310981 IGF1RP08069 1367 aa24.51■■□□□ 1.51
SFT2D3-201ENST00000310981 NESP48681 1621 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms