RNA–Protein interactions for RNA: ENST00000414034.7

GHDC-202, Transcript of GH3 domain containing, humanhuman

TSL 2 BASIC

Gene GHDC, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-202ENST00000414034 NISCHQ9Y2I1 1504 aa33.06■■■□□ 2.88
GHDC-202ENST00000414034 HRCP23327 699 aa29.31■■■□□ 2.28
GHDC-202ENST00000414034 SHROOM4Q9ULL8 1493 aa28.98■■■□□ 2.23
GHDC-202ENST00000414034 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
GHDC-202ENST00000414034 CCDC180Q9P1Z9 1646 aa28.7■■■□□ 2.19
GHDC-202ENST00000414034 PCGF6Q9BYE7 350 aa28.65■■■□□ 2.18
GHDC-202ENST00000414034 MYO15BQ96JP2 1530 aa28.62■■■□□ 2.17
GHDC-202ENST00000414034 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.16
GHDC-202ENST00000414034 PPARGC1BQ86YN6 1023 aaKnown RBP28.51■■■□□ 2.16
GHDC-202ENST00000414034 ABCC9O60706 1549 aa28.49■■■□□ 2.15
GHDC-202ENST00000414034 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.13
GHDC-202ENST00000414034 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
GHDC-202ENST00000414034 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.1
GHDC-202ENST00000414034 TRIM26Q12899 539 aaPredicted RBP27.89■■■□□ 2.06
GHDC-202ENST00000414034 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
GHDC-202ENST00000414034 LOC105371045A0A1W2PR82 267 aa27.74■■■□□ 2.03
GHDC-202ENST00000414034 SCAF1Q9H7N4 1312 aaKnown RBP27.6■■■□□ 2.01
GHDC-202ENST00000414034 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
GHDC-202ENST00000414034 MYT1Q01538 1121 aa27.27■■□□□ 1.96
GHDC-202ENST00000414034 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.94
GHDC-202ENST00000414034 NACADO15069 1562 aa27.06■■□□□ 1.92
GHDC-202ENST00000414034 ACIN1Q9UKV3 1341 aaKnown RBP27.04■■□□□ 1.92
GHDC-202ENST00000414034 NEUROD1Q13562 356 aa26.89■■□□□ 1.89
GHDC-202ENST00000414034 TRIM41Q8WV44 630 aa26.84■■□□□ 1.89
GHDC-202ENST00000414034 CENPBP07199 599 aaPredicted RBP26.78■■□□□ 1.88
GHDC-202ENST00000414034 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
GHDC-202ENST00000414034 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
GHDC-202ENST00000414034 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
GHDC-202ENST00000414034 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
GHDC-202ENST00000414034 DIEXFQ68CQ4 756 aaKnown RBP26.61■■□□□ 1.85
GHDC-202ENST00000414034 CCER1Q8TC90 406 aaPredicted RBP26.6■■□□□ 1.85
GHDC-202ENST00000414034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.57■■□□□ 1.84
GHDC-202ENST00000414034 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
GHDC-202ENST00000414034 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.83
GHDC-202ENST00000414034 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
GHDC-202ENST00000414034 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
GHDC-202ENST00000414034 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
GHDC-202ENST00000414034 ZNF316A6NFI3 1004 aaPredicted RBP26.14■■□□□ 1.78
GHDC-202ENST00000414034 YTHDC1Q96MU7 727 aaKnown RBP26.04■■□□□ 1.76
GHDC-202ENST00000414034 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.76
GHDC-202ENST00000414034 MIER1Q8N108 512 aa25.88■■□□□ 1.73
GHDC-202ENST00000414034 TTBK1Q5TCY1 1321 aaPredicted RBP25.85■■□□□ 1.73
GHDC-202ENST00000414034 CEP162Q5TB80 1403 aa25.79■■□□□ 1.72
GHDC-202ENST00000414034 MROH2BQ7Z745 1585 aa25.76■■□□□ 1.71
GHDC-202ENST00000414034 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
GHDC-202ENST00000414034 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
GHDC-202ENST00000414034 CLSPNQ9HAW4 1339 aa25.7■■□□□ 1.71
GHDC-202ENST00000414034 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
GHDC-202ENST00000414034 TNIKQ9UKE5 1360 aa25.68■■□□□ 1.7
GHDC-202ENST00000414034 WIZO95785 1651 aa25.67■■□□□ 1.7
GHDC-202ENST00000414034 BAZ1AQ9NRL2 1556 aaPredicted RBP25.58■■□□□ 1.69
GHDC-202ENST00000414034 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
GHDC-202ENST00000414034 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
GHDC-202ENST00000414034 EEA1Q15075 1411 aa25.48■■□□□ 1.67
GHDC-202ENST00000414034 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
GHDC-202ENST00000414034 ANP32EQ9BTT0 268 aa25.45■■□□□ 1.67
GHDC-202ENST00000414034 UBTFP17480 764 aaKnown RBP25.45■■□□□ 1.66
GHDC-202ENST00000414034 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
GHDC-202ENST00000414034 SOGA1O94964 1423 aa25.43■■□□□ 1.66
GHDC-202ENST00000414034 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
GHDC-202ENST00000414034 TSHZ2Q9NRE2 1034 aa25.38■■□□□ 1.65
GHDC-202ENST00000414034 GOLGA3Q08378 1498 aa25.35■■□□□ 1.65
GHDC-202ENST00000414034 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
GHDC-202ENST00000414034 TOP2AP11388 1531 aaKnown RBP25.26■■□□□ 1.64
GHDC-202ENST00000414034 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
GHDC-202ENST00000414034 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
GHDC-202ENST00000414034 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
GHDC-202ENST00000414034 APLP2Q06481 763 aa25.13■■□□□ 1.61
GHDC-202ENST00000414034 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
GHDC-202ENST00000414034 CLIP1P30622 1438 aa25.12■■□□□ 1.61
GHDC-202ENST00000414034 CEP164Q9UPV0 1460 aa25.11■■□□□ 1.61
GHDC-202ENST00000414034 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.61
GHDC-202ENST00000414034 DHX57Q6P158 1386 aaKnown RBP25.05■■□□□ 1.6
GHDC-202ENST00000414034 KIF21BO75037 1637 aa25.04■■□□□ 1.6
GHDC-202ENST00000414034 NCAPD3P42695 1498 aa25.03■■□□□ 1.6
GHDC-202ENST00000414034 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
GHDC-202ENST00000414034 BCANQ96GW7 911 aa24.87■■□□□ 1.57
GHDC-202ENST00000414034 FKBP8Q14318 412 aa24.85■■□□□ 1.57
GHDC-202ENST00000414034 HMGXB3Q12766 1538 aa24.84■■□□□ 1.57
GHDC-202ENST00000414034 PEG3Q9GZU2 1588 aa24.83■■□□□ 1.57
GHDC-202ENST00000414034 RBM19Q9Y4C8 960 aaKnown RBP24.8■■□□□ 1.56
GHDC-202ENST00000414034 KCNH8Q96L42 1107 aa24.79■■□□□ 1.56
GHDC-202ENST00000414034 RAPGEF2Q9Y4G8 1499 aa24.77■■□□□ 1.56
GHDC-202ENST00000414034 NEFLP07196 543 aa24.74■■□□□ 1.55
GHDC-202ENST00000414034 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
GHDC-202ENST00000414034 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
GHDC-202ENST00000414034 CUX2O14529 1486 aa24.69■■□□□ 1.54
GHDC-202ENST00000414034 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
GHDC-202ENST00000414034 NESP48681 1621 aa24.66■■□□□ 1.54
GHDC-202ENST00000414034 KANK4Q5T7N3 995 aaPredicted RBP24.6■■□□□ 1.53
GHDC-202ENST00000414034 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
GHDC-202ENST00000414034 DDX10Q13206 875 aaKnown RBP24.55■■□□□ 1.52
GHDC-202ENST00000414034 CCNB3Q8WWL7 1395 aa24.53■■□□□ 1.52
GHDC-202ENST00000414034 MSH5O43196 834 aa24.51■■□□□ 1.51
GHDC-202ENST00000414034 ITGAEP38570 1179 aa24.51■■□□□ 1.51
GHDC-202ENST00000414034 CCER2I3L3R5 266 aa24.49■■□□□ 1.51
GHDC-202ENST00000414034 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
GHDC-202ENST00000414034 ERCC6Q03468 1493 aa24.47■■□□□ 1.51
GHDC-202ENST00000414034 FANCIQ9NVI1 1328 aa24.47■■□□□ 1.51
GHDC-202ENST00000414034 MAPKBP1O60336 1514 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms