RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 DCAF8L2P0C7V8 631 aa29.86■■■□□ 2.37
PDE1C-206ENST00000396193 NISCHQ9Y2I1 1504 aa29.38■■■□□ 2.29
PDE1C-206ENST00000396193 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
PDE1C-206ENST00000396193 SHROOM4Q9ULL8 1493 aa28.66■■■□□ 2.18
PDE1C-206ENST00000396193 PELP1Q8IZL8 1130 aaKnown RBP28.3■■■□□ 2.12
PDE1C-206ENST00000396193 PCGF6Q9BYE7 350 aa28.1■■■□□ 2.09
PDE1C-206ENST00000396193 EHMT2Q96KQ7 1210 aa28.09■■■□□ 2.09
PDE1C-206ENST00000396193 MYT1Q01538 1121 aa27.77■■■□□ 2.04
PDE1C-206ENST00000396193 CENPBP07199 599 aaPredicted RBP27.63■■■□□ 2.01
PDE1C-206ENST00000396193 ZEB1P37275 1124 aaPredicted RBP27.57■■■□□ 2
PDE1C-206ENST00000396193 FAM9AQ8IZU1 332 aaPredicted RBP27.56■■■□□ 2
PDE1C-206ENST00000396193 APLP2Q06481 763 aa27.43■■□□□ 1.98
PDE1C-206ENST00000396193 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
PDE1C-206ENST00000396193 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
PDE1C-206ENST00000396193 HRCP23327 699 aa27.16■■□□□ 1.94
PDE1C-206ENST00000396193 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
PDE1C-206ENST00000396193 ERICH6Q7L0X2 663 aa27.09■■□□□ 1.93
PDE1C-206ENST00000396193 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
PDE1C-206ENST00000396193 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
PDE1C-206ENST00000396193 RANGAP1P46060 587 aaPredicted RBP26.63■■□□□ 1.85
PDE1C-206ENST00000396193 NEFLP07196 543 aa26.6■■□□□ 1.85
PDE1C-206ENST00000396193 PPARGC1BQ86YN6 1023 aaKnown RBP26.58■■□□□ 1.85
PDE1C-206ENST00000396193 UBTFP17480 764 aaKnown RBP26.58■■□□□ 1.85
PDE1C-206ENST00000396193 CHIC1Q5VXU3 224 aa26.57■■□□□ 1.84
PDE1C-206ENST00000396193 LOC105371045A0A1W2PR82 267 aa26.49■■□□□ 1.83
PDE1C-206ENST00000396193 ATP1B4Q9UN42 357 aaPredicted RBP26.2■■□□□ 1.79
PDE1C-206ENST00000396193 DIEXFQ68CQ4 756 aaKnown RBP26.03■■□□□ 1.76
PDE1C-206ENST00000396193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
PDE1C-206ENST00000396193 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
PDE1C-206ENST00000396193 GTF3C3Q9Y5Q9 886 aa25.89■■□□□ 1.73
PDE1C-206ENST00000396193 ITGAEP38570 1179 aa25.78■■□□□ 1.72
PDE1C-206ENST00000396193 DAXXQ9UER7 740 aaPredicted RBP25.64■■□□□ 1.69
PDE1C-206ENST00000396193 ACIN1Q9UKV3 1341 aaKnown RBP25.61■■□□□ 1.69
PDE1C-206ENST00000396193 RTL5Q5HYW3 569 aaPredicted RBP25.55■■□□□ 1.68
PDE1C-206ENST00000396193 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
PDE1C-206ENST00000396193 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.65
PDE1C-206ENST00000396193 BCANQ96GW7 911 aa25.32■■□□□ 1.64
PDE1C-206ENST00000396193 CNGB1Q14028 1251 aaPredicted RBP25.29■■□□□ 1.64
PDE1C-206ENST00000396193 CDK11AQ9UQ88 783 aaPredicted RBP25.15■■□□□ 1.62
PDE1C-206ENST00000396193 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
PDE1C-206ENST00000396193 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
PDE1C-206ENST00000396193 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
PDE1C-206ENST00000396193 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
PDE1C-206ENST00000396193 ANP32CO43423 234 aa25.06■■□□□ 1.6
PDE1C-206ENST00000396193 CLSPNQ9HAW4 1339 aa25■■□□□ 1.59
PDE1C-206ENST00000396193 TRIM52Q96A61 297 aa24.85■■□□□ 1.57
PDE1C-206ENST00000396193 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
PDE1C-206ENST00000396193 FKBP8Q14318 412 aa24.72■■□□□ 1.55
PDE1C-206ENST00000396193 MYT1LQ9UL68 1186 aa24.72■■□□□ 1.55
PDE1C-206ENST00000396193 ANP32AP39687 249 aaKnown RBP24.71■■□□□ 1.55
PDE1C-206ENST00000396193 EIF5BO60841 1220 aaKnown RBP24.59■■□□□ 1.53
PDE1C-206ENST00000396193 SLC4A1APQ9BWU0 796 aaKnown RBP24.58■■□□□ 1.52
PDE1C-206ENST00000396193 ZNF326Q5BKZ1 582 aaKnown RBP24.57■■□□□ 1.52
PDE1C-206ENST00000396193 MYO15BQ96JP2 1530 aa24.55■■□□□ 1.52
PDE1C-206ENST00000396193 MIER1Q8N108 512 aa24.54■■□□□ 1.52
PDE1C-206ENST00000396193 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.52
PDE1C-206ENST00000396193 DDX10Q13206 875 aaKnown RBP24.48■■□□□ 1.51
PDE1C-206ENST00000396193 ABCC9O60706 1549 aa24.46■■□□□ 1.51
PDE1C-206ENST00000396193 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
PDE1C-206ENST00000396193 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
PDE1C-206ENST00000396193 NPM2Q86SE8 214 aaKnown RBP24.42■■□□□ 1.5
PDE1C-206ENST00000396193 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
PDE1C-206ENST00000396193 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
PDE1C-206ENST00000396193 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
PDE1C-206ENST00000396193 GLIPR1L2Q4G1C9 344 aa24.32■■□□□ 1.48
PDE1C-206ENST00000396193 NBR1Q14596 966 aa24.31■■□□□ 1.48
PDE1C-206ENST00000396193 ZBTB47Q9UFB7 747 aaPredicted RBP24.25■■□□□ 1.47
PDE1C-206ENST00000396193 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
PDE1C-206ENST00000396193 FAM9BQ8IZU0 186 aa24.24■■□□□ 1.47
PDE1C-206ENST00000396193 CCDC180Q9P1Z9 1646 aa24.21■■□□□ 1.47
PDE1C-206ENST00000396193 CCDC136Q96JN2 1154 aa24.16■■□□□ 1.46
PDE1C-206ENST00000396193 IRX6P78412 446 aaPredicted RBP24.09■■□□□ 1.45
PDE1C-206ENST00000396193 ARID3CA6NKF2 412 aa24.07■■□□□ 1.44
PDE1C-206ENST00000396193 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
PDE1C-206ENST00000396193 MRS2Q9HD23 443 aa24.04■■□□□ 1.44
PDE1C-206ENST00000396193 ANP32BQ92688 251 aaKnown RBP24.03■■□□□ 1.44
PDE1C-206ENST00000396193 BCL11AQ9H165 835 aa24.02■■□□□ 1.44
PDE1C-206ENST00000396193 HIRIP3Q9BW71 556 aaPredicted RBP24.01■■□□□ 1.43
PDE1C-206ENST00000396193 CLIP1P30622 1438 aa24■■□□□ 1.43
PDE1C-206ENST00000396193 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
PDE1C-206ENST00000396193 SALL2Q9Y467 1007 aaPredicted RBP23.97■■□□□ 1.43
PDE1C-206ENST00000396193 CEP162Q5TB80 1403 aa23.96■■□□□ 1.43
PDE1C-206ENST00000396193 ZNF777Q9ULD5 760 aaPredicted RBP23.95■■□□□ 1.42
PDE1C-206ENST00000396193 UPF2Q9HAU5 1272 aaKnown RBP23.92■■□□□ 1.42
PDE1C-206ENST00000396193 SUPT16HQ9Y5B9 1047 aaKnown RBP23.9■■□□□ 1.42
PDE1C-206ENST00000396193 NEFMP07197 916 aa23.87■■□□□ 1.41
PDE1C-206ENST00000396193 FBLN2P98095 1184 aa23.86■■□□□ 1.41
PDE1C-206ENST00000396193 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
PDE1C-206ENST00000396193 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
PDE1C-206ENST00000396193 HSP90AA1P07900 732 aaKnown RBP23.83■■□□□ 1.41
PDE1C-206ENST00000396193 EEA1Q15075 1411 aa23.83■■□□□ 1.4
PDE1C-206ENST00000396193 EIF4G2P78344 907 aaKnown RBP eCLIP23.82■■□□□ 1.4
PDE1C-206ENST00000396193 GOLGA3Q08378 1498 aa23.79■■□□□ 1.4
PDE1C-206ENST00000396193 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.79■■□□□ 1.4
PDE1C-206ENST00000396193 TNIKQ9UKE5 1360 aa23.77■■□□□ 1.4
PDE1C-206ENST00000396193 ARXQ96QS3 562 aa23.76■■□□□ 1.39
PDE1C-206ENST00000396193 DDRGK1Q96HY6 314 aa23.72■■□□□ 1.39
PDE1C-206ENST00000396193 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
PDE1C-206ENST00000396193 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
PDE1C-206ENST00000396193 PPP4R2Q9NY27 417 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms