Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SHFQ7M4L6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHFQ7M4L6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ME2P1-201ENST00000426028 1970 ntBASIC15.19■□□□□ 0.02
SHFQ7M4L6 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 DRAXINP1-201ENST00000437611 948 ntBASIC15.19■□□□□ 0.02
SHFQ7M4L6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 FAM86EP-206ENST00000510506 987 ntBASIC15.19■□□□□ 0.02
SHFQ7M4L6 AL049597.2-201ENST00000565575 961 ntBASIC15.19■□□□□ 0.02
SHFQ7M4L6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 INTS4P1-201ENST00000438455 1935 ntBASIC15.19■□□□□ 0.02
SHFQ7M4L6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHFQ7M4L6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 SIGLEC30P-201ENST00000455569 941 ntBASIC15.18■□□□□ 0.02
SHFQ7M4L6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 AP005901.3-202ENST00000581653 237 ntBASIC15.18■□□□□ 0.02
SHFQ7M4L6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 AC116407.4-201ENST00000623319 1061 ntBASIC15.18■□□□□ 0.02
SHFQ7M4L6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SHFQ7M4L6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SHFQ7M4L6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms