Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.78□□□□□ -0.2
CLN5O75503 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.78□□□□□ -0.2
CLN5O75503 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CLN5O75503 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN5O75503 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN5O75503 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CLN5O75503 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.78□□□□□ -0.2
CLN5O75503 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLN5O75503 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLN5O75503 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLN5O75503 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLN5O75503 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CLN5O75503 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 SNX18-202ENST00000343017 3140 ntBASIC13.77□□□□□ -0.21
CLN5O75503 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 AC112907.2-201ENST00000448639 330 ntBASIC13.77□□□□□ -0.21
CLN5O75503 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.77□□□□□ -0.21
CLN5O75503 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 AC005332.3-201ENST00000589904 676 ntBASIC13.77□□□□□ -0.21
CLN5O75503 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.77□□□□□ -0.21
CLN5O75503 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.77□□□□□ -0.21
CLN5O75503 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLN5O75503 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLN5O75503 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLN5O75503 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN5O75503 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CLN5O75503 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLN5O75503 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLN5O75503 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 AC138035.3-201ENST00000622706 2791 ntBASIC13.76□□□□□ -0.21
CLN5O75503 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.76□□□□□ -0.21
CLN5O75503 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLN5O75503 AK4P3-201ENST00000418260 669 ntBASIC13.76□□□□□ -0.21
CLN5O75503 AC096633.1-201ENST00000422446 749 ntBASIC13.76□□□□□ -0.21
CLN5O75503 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 KRT18P38-201ENST00000449496 1282 ntBASIC13.76□□□□□ -0.21
CLN5O75503 AC092647.4-201ENST00000457211 535 ntBASIC13.76□□□□□ -0.21
CLN5O75503 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLN5O75503 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.76□□□□□ -0.21
CLN5O75503 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms