RNA–Protein interactions for RNA: ENST00000600042.5

SARS2-212, Transcript of seryl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene SARS2, Length 1,630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS2-212ENST00000600042 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
SARS2-212ENST00000600042 CCDC180Q9P1Z9 1646 aa34.96■■■■□ 3.19
SARS2-212ENST00000600042 ZCCHC6Q5VYS8 1495 aaKnown RBP33.51■■■□□ 2.96
SARS2-212ENST00000600042 DCAF1Q9Y4B6 1507 aa33.08■■■□□ 2.89
SARS2-212ENST00000600042 ABCC9O60706 1549 aa32.96■■■□□ 2.87
SARS2-212ENST00000600042 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
SARS2-212ENST00000600042 MYO15BQ96JP2 1530 aa32.74■■■□□ 2.83
SARS2-212ENST00000600042 NACADO15069 1562 aa32.54■■■□□ 2.8
SARS2-212ENST00000600042 SHROOM4Q9ULL8 1493 aa32.38■■■□□ 2.77
SARS2-212ENST00000600042 RB1CC1Q8TDY2 1594 aa32.27■■■□□ 2.76
SARS2-212ENST00000600042 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
SARS2-212ENST00000600042 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
SARS2-212ENST00000600042 BICRAQ9NZM4 1560 aa31.24■■■□□ 2.59
SARS2-212ENST00000600042 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
SARS2-212ENST00000600042 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.562e-6■■■■□ 20.7
SARS2-212ENST00000600042 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
SARS2-212ENST00000600042 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
SARS2-212ENST00000600042 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
SARS2-212ENST00000600042 MROH2BQ7Z745 1585 aa30.8■■■□□ 2.52
SARS2-212ENST00000600042 SMARCA4P51532 1647 aa30.73■■■□□ 2.51
SARS2-212ENST00000600042 WIZO95785 1651 aa30.58■■■□□ 2.49
SARS2-212ENST00000600042 PEG3Q9GZU2 1588 aa30.39■■■□□ 2.45
SARS2-212ENST00000600042 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
SARS2-212ENST00000600042 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
SARS2-212ENST00000600042 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
SARS2-212ENST00000600042 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
SARS2-212ENST00000600042 BAZ1BQ9UIG0 1483 aaKnown RBP30.05■■■□□ 2.4
SARS2-212ENST00000600042 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
SARS2-212ENST00000600042 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
SARS2-212ENST00000600042 CCDC88BA6NC98 1476 aa29.94■■■□□ 2.38
SARS2-212ENST00000600042 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.38
SARS2-212ENST00000600042 CHIC1Q5VXU3 224 aa29.81■■■□□ 2.36
SARS2-212ENST00000600042 TRIM41Q8WV44 630 aa29.35■■■□□ 2.29
SARS2-212ENST00000600042 CFTRP13569 1480 aa29.29■■■□□ 2.28
SARS2-212ENST00000600042 PRDM2Q13029 1718 aa29.27■■■□□ 2.28
SARS2-212ENST00000600042 ABCC8Q09428 1581 aa29.25■■■□□ 2.27
SARS2-212ENST00000600042 CADPSQ9ULU8 1353 aa29.2■■■□□ 2.26
SARS2-212ENST00000600042 WRNQ14191 1432 aaPredicted RBP eCLIP29.11■■■□□ 2.25
SARS2-212ENST00000600042 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
SARS2-212ENST00000600042 LAMC3Q9Y6N6 1575 aa29.03■■■□□ 2.24
SARS2-212ENST00000600042 SYNJ1O43426 1573 aa28.98■■■□□ 2.23
SARS2-212ENST00000600042 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
SARS2-212ENST00000600042 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
SARS2-212ENST00000600042 NESP48681 1621 aa28.91■■■□□ 2.22
SARS2-212ENST00000600042 FANCD2Q9BXW9 1451 aa28.87■■■□□ 2.21
SARS2-212ENST00000600042 CUX1P39880 1505 aa28.82■■■□□ 2.2
SARS2-212ENST00000600042 PDS5BQ9NTI5 1447 aa28.78■■■□□ 2.2
SARS2-212ENST00000600042 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
SARS2-212ENST00000600042 EEA1Q15075 1411 aa28.72■■■□□ 2.19
SARS2-212ENST00000600042 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
SARS2-212ENST00000600042 SOGA1O94964 1423 aa28.66■■■□□ 2.18
SARS2-212ENST00000600042 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
SARS2-212ENST00000600042 DNMBPQ6XZF7 1577 aa28.63■■■□□ 2.17
SARS2-212ENST00000600042 LOC105371045A0A1W2PR82 267 aa28.61■■■□□ 2.17
SARS2-212ENST00000600042 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
SARS2-212ENST00000600042 TOPBP1Q92547 1522 aa28.56■■■□□ 2.16
SARS2-212ENST00000600042 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
SARS2-212ENST00000600042 CSRNP3Q8WYN3 585 aa28.51■■■□□ 2.15
SARS2-212ENST00000600042 URB2Q14146 1524 aaKnown RBP28.5■■■□□ 2.15
SARS2-212ENST00000600042 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
SARS2-212ENST00000600042 POLA1P09884 1462 aaPredicted RBP28.39■■■□□ 2.14
SARS2-212ENST00000600042 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.14
SARS2-212ENST00000600042 KIF21BO75037 1637 aa28.34■■■□□ 2.13
SARS2-212ENST00000600042 ERCC6Q03468 1493 aa28.32■■■□□ 2.12
SARS2-212ENST00000600042 CUX2O14529 1486 aa28.31■■■□□ 2.12
SARS2-212ENST00000600042 ABCA10Q8WWZ4 1543 aa28.3■■■□□ 2.12
SARS2-212ENST00000600042 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
SARS2-212ENST00000600042 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
SARS2-212ENST00000600042 RAD54L2Q9Y4B4 1467 aa28.26■■■□□ 2.11
SARS2-212ENST00000600042 WDR62O43379 1518 aa28.26■■■□□ 2.11
SARS2-212ENST00000600042 WDR97A6NE52 1622 aa28.24■■■□□ 2.11
SARS2-212ENST00000600042 THOC2Q8NI27 1593 aaKnown RBP28.18■■■□□ 2.1
SARS2-212ENST00000600042 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
SARS2-212ENST00000600042 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
SARS2-212ENST00000600042 ERICH3Q5RHP9 1530 aa28.16■■■□□ 2.1
SARS2-212ENST00000600042 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
SARS2-212ENST00000600042 IGF1RP08069 1367 aa28.13■■■□□ 2.09
SARS2-212ENST00000600042 UBTFP17480 764 aaKnown RBP28.11■■■□□ 2.09
SARS2-212ENST00000600042 RAPGEF2Q9Y4G8 1499 aa28.11■■■□□ 2.09
SARS2-212ENST00000600042 ABCA5Q8WWZ7 1642 aa28.09■■■□□ 2.09
SARS2-212ENST00000600042 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
SARS2-212ENST00000600042 CUL7Q14999 1698 aa28.02■■■□□ 2.08
SARS2-212ENST00000600042 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
SARS2-212ENST00000600042 CARMIL1Q5VZK9 1371 aa28■■■□□ 2.07
SARS2-212ENST00000600042 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
SARS2-212ENST00000600042 CEP162Q5TB80 1403 aa27.98■■■□□ 2.07
SARS2-212ENST00000600042 PBRM1Q86U86 1689 aa27.92■■■□□ 2.06
SARS2-212ENST00000600042 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.055e-9■□□□□ 10.4
SARS2-212ENST00000600042 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
SARS2-212ENST00000600042 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
SARS2-212ENST00000600042 EIF4G3O43432 1585 aaKnown RBP27.79■■■□□ 2.04
SARS2-212ENST00000600042 CLIP1P30622 1438 aa27.79■■■□□ 2.04
SARS2-212ENST00000600042 FHAD1B1AJZ9 1412 aa27.72■■■□□ 2.03
SARS2-212ENST00000600042 ADAMTS12P58397 1594 aa27.71■■■□□ 2.03
SARS2-212ENST00000600042 CTTNBP2Q8WZ74 1663 aa27.7■■■□□ 2.02
SARS2-212ENST00000600042 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
SARS2-212ENST00000600042 SNAPC4Q5SXM2 1469 aa27.6■■■□□ 2.01
SARS2-212ENST00000600042 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
SARS2-212ENST00000600042 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
SARS2-212ENST00000600042 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms