RNA–Protein interactions for RNA: ENST00000333881.3

LCE3C-201, Transcript of late cornified envelope 3C, humanhuman

APPRIS P1 BASIC

Gene LCE3C, Length 425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3C-201ENST00000333881 NISCHQ9Y2I1 1504 aa46.43■■■■■ 5.02
LCE3C-201ENST00000333881 CCDC180Q9P1Z9 1646 aa41.45■■■■■ 4.23
LCE3C-201ENST00000333881 ABCC9O60706 1549 aa41.28■■■■■ 4.2
LCE3C-201ENST00000333881 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
LCE3C-201ENST00000333881 NACADO15069 1562 aa39.15■■■■□ 3.86
LCE3C-201ENST00000333881 DCAF8L2P0C7V8 631 aa39.14■■■■□ 3.86
LCE3C-201ENST00000333881 MYO15BQ96JP2 1530 aa38.68■■■■□ 3.78
LCE3C-201ENST00000333881 ZCCHC6Q5VYS8 1495 aaKnown RBP38.54■■■■□ 3.76
LCE3C-201ENST00000333881 PABPN1Q86U42 306 aaKnown RBP eCLIP38.53■■■■□ 3.76
LCE3C-201ENST00000333881 DNAJC5BQ9UF47 199 aa38.53■■■■□ 3.76
LCE3C-201ENST00000333881 UNC13AQ9UPW8 1703 aa38.49■■■■□ 3.75
LCE3C-201ENST00000333881 DCAF1Q9Y4B6 1507 aa38.31■■■■□ 3.72
LCE3C-201ENST00000333881 BICRAQ9NZM4 1560 aa38.24■■■■□ 3.71
LCE3C-201ENST00000333881 SCRIBQ14160 1630 aa37.87■■■■□ 3.65
LCE3C-201ENST00000333881 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
LCE3C-201ENST00000333881 CC2D2AQ9P2K1 1620 aa37.27■■■■□ 3.56
LCE3C-201ENST00000333881 EIF4G1Q04637 1599 aaKnown RBP37.25■■■■□ 3.55
LCE3C-201ENST00000333881 CECR2Q9BXF3 1484 aa37.13■■■■□ 3.53
LCE3C-201ENST00000333881 NCAPD3P42695 1498 aa36.17■■■■□ 3.38
LCE3C-201ENST00000333881 SMARCA4P51532 1647 aa36.14■■■■□ 3.38
LCE3C-201ENST00000333881 ATAD2BQ9ULI0 1458 aa36.13■■■■□ 3.37
LCE3C-201ENST00000333881 SMARCA2P51531 1590 aa35.98■■■■□ 3.35
LCE3C-201ENST00000333881 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
LCE3C-201ENST00000333881 HMGXB3Q12766 1538 aa35.89■■■■□ 3.34
LCE3C-201ENST00000333881 MROH2BQ7Z745 1585 aa35.81■■■■□ 3.32
LCE3C-201ENST00000333881 BAZ1BQ9UIG0 1483 aaKnown RBP35.77■■■■□ 3.32
LCE3C-201ENST00000333881 PEG3Q9GZU2 1588 aa35.76■■■■□ 3.31
LCE3C-201ENST00000333881 ERCC6Q03468 1493 aa35.57■■■■□ 3.28
LCE3C-201ENST00000333881 NESP48681 1621 aa35.57■■■■□ 3.28
LCE3C-201ENST00000333881 WIZO95785 1651 aa35.39■■■■□ 3.26
LCE3C-201ENST00000333881 CUX2O14529 1486 aa35.36■■■■□ 3.25
LCE3C-201ENST00000333881 LAMC3Q9Y6N6 1575 aa35.26■■■■□ 3.24
LCE3C-201ENST00000333881 RSF1Q96T23 1441 aaPredicted RBP35.18■■■■□ 3.22
LCE3C-201ENST00000333881 CADPSQ9ULU8 1353 aa35.1■■■■□ 3.21
LCE3C-201ENST00000333881 DNAJC5Q9H3Z4 198 aa35.08■■■■□ 3.21
LCE3C-201ENST00000333881 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
LCE3C-201ENST00000333881 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
LCE3C-201ENST00000333881 KIF21AQ7Z4S6 1674 aa35.06■■■■□ 3.2
LCE3C-201ENST00000333881 TOP2AP11388 1531 aaKnown RBP34.92■■■■□ 3.18
LCE3C-201ENST00000333881 MRC2Q9UBG0 1479 aa34.77■■■■□ 3.16
LCE3C-201ENST00000333881 CFTRP13569 1480 aa34.75■■■■□ 3.15
LCE3C-201ENST00000333881 FANCD2Q9BXW9 1451 aa34.7■■■■□ 3.15
LCE3C-201ENST00000333881 CEP164Q9UPV0 1460 aa34.68■■■■□ 3.14
LCE3C-201ENST00000333881 WDR62O43379 1518 aa34.66■■■■□ 3.14
LCE3C-201ENST00000333881 CCDC88BA6NC98 1476 aa34.57■■■■□ 3.12
LCE3C-201ENST00000333881 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
LCE3C-201ENST00000333881 PRDM2Q13029 1718 aa34.36■■■■□ 3.09
LCE3C-201ENST00000333881 TOPBP1Q92547 1522 aa34.09■■■■□ 3.05
LCE3C-201ENST00000333881 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
LCE3C-201ENST00000333881 ZNF608Q9ULD9 1512 aaPredicted RBP33.96■■■■□ 3.03
LCE3C-201ENST00000333881 ABCC8Q09428 1581 aa33.96■■■■□ 3.03
LCE3C-201ENST00000333881 DNMBPQ6XZF7 1577 aa33.95■■■■□ 3.03
LCE3C-201ENST00000333881 SUPT5HO00267 1087 aaKnown RBP33.9■■■■□ 3.02
LCE3C-201ENST00000333881 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
LCE3C-201ENST00000333881 POLA1P09884 1462 aaPredicted RBP33.76■■■□□ 2.99
LCE3C-201ENST00000333881 TARBP1Q13395 1621 aaKnown RBP33.74■■■□□ 2.99
LCE3C-201ENST00000333881 EIF4G3O43432 1585 aaKnown RBP33.72■■■□□ 2.99
LCE3C-201ENST00000333881 TRIM41Q8WV44 630 aa33.71■■■□□ 2.99
LCE3C-201ENST00000333881 AQRO60306 1485 aaKnown RBP eCLIP33.69■■■□□ 2.98
LCE3C-201ENST00000333881 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
LCE3C-201ENST00000333881 CUX1P39880 1505 aa33.62■■■□□ 2.97
LCE3C-201ENST00000333881 SOGA1O94964 1423 aa33.62■■■□□ 2.97
LCE3C-201ENST00000333881 FGD5Q6ZNL6 1462 aa33.59■■■□□ 2.97
LCE3C-201ENST00000333881 TDRD9Q8NDG6 1382 aaKnown RBP33.54■■■□□ 2.96
LCE3C-201ENST00000333881 CHD1O14646 1710 aa33.42■■■□□ 2.94
LCE3C-201ENST00000333881 FBLN2P98095 1184 aa33.41■■■□□ 2.94
LCE3C-201ENST00000333881 RIMBP3CA6NJZ7 1639 aa33.37■■■□□ 2.93
LCE3C-201ENST00000333881 RIMBP3BA6NNM3 1639 aa33.37■■■□□ 2.93
LCE3C-201ENST00000333881 RIMBP3Q9UFD9 1639 aa33.37■■■□□ 2.93
LCE3C-201ENST00000333881 WDR97A6NE52 1622 aa33.33■■■□□ 2.93
LCE3C-201ENST00000333881 SNAPC4Q5SXM2 1469 aa33.32■■■□□ 2.92
LCE3C-201ENST00000333881 ARHGEF11O15085 1522 aa33.31■■■□□ 2.92
LCE3C-201ENST00000333881 GRIN2BQ13224 1484 aa33.25■■■□□ 2.91
LCE3C-201ENST00000333881 MAGI1Q96QZ7 1491 aaPredicted RBP33.2■■■□□ 2.91
LCE3C-201ENST00000333881 ABCA10Q8WWZ4 1543 aa33.2■■■□□ 2.91
LCE3C-201ENST00000333881 GAPVD1Q14C86 1478 aa33.19■■■□□ 2.9
LCE3C-201ENST00000333881 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
LCE3C-201ENST00000333881 WRNQ14191 1432 aaPredicted RBP eCLIP33.16■■■□□ 2.9
LCE3C-201ENST00000333881 PBRM1Q86U86 1689 aa33.13■■■□□ 2.89
LCE3C-201ENST00000333881 SYNJ1O43426 1573 aa33.13■■■□□ 2.89
LCE3C-201ENST00000333881 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
LCE3C-201ENST00000333881 ABCA5Q8WWZ7 1642 aa33.12■■■□□ 2.89
LCE3C-201ENST00000333881 BIVM-ERCC5R4GMW8 1640 aa33.11■■■□□ 2.89
LCE3C-201ENST00000333881 SYNJ2O15056 1496 aa33.11■■■□□ 2.89
LCE3C-201ENST00000333881 CYB5RLQ6IPT4 315 aa33.1■■■□□ 2.89
LCE3C-201ENST00000333881 CLASP1Q7Z460 1538 aa33.05■■■□□ 2.88
LCE3C-201ENST00000333881 ARAP1Q96P48 1450 aa33.01■■■□□ 2.88
LCE3C-201ENST00000333881 ADAMTS12P58397 1594 aa32.85■■■□□ 2.85
LCE3C-201ENST00000333881 GRIN2AQ12879 1464 aa32.84■■■□□ 2.85
LCE3C-201ENST00000333881 FHAD1B1AJZ9 1412 aa32.77■■■□□ 2.84
LCE3C-201ENST00000333881 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
LCE3C-201ENST00000333881 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
LCE3C-201ENST00000333881 NUP160Q12769 1436 aa32.72■■■□□ 2.83
LCE3C-201ENST00000333881 ERCC6L2Q5T890 1561 aa32.62■■■□□ 2.81
LCE3C-201ENST00000333881 TRHP20396 242 aaPredicted RBP32.6■■■□□ 2.81
LCE3C-201ENST00000333881 SHROOM2Q13796 1616 aa32.51■■■□□ 2.8
LCE3C-201ENST00000333881 KIF27Q86VH2 1401 aa32.5■■■□□ 2.79
LCE3C-201ENST00000333881 IGF1RP08069 1367 aa32.49■■■□□ 2.79
LCE3C-201ENST00000333881 JPH4Q96JJ6 628 aa32.42■■■□□ 2.78
LCE3C-201ENST00000333881 PRG4Q92954 1404 aaPredicted RBP32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms