Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC132938.6-201ENST00000623828 1655 ntBASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC009102.3-201ENST00000623118 1491 ntBASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MIPEPP3-201ENST00000412105 444 ntBASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AL390719.1-204ENST00000412397 1219 ntBASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC124947.2-201ENST00000547118 1133 ntBASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 AC092118.2-201ENST00000613495 667 ntBASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
BOLA2-SMG1P6H3BVE0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms