RNA–Protein interactions for RNA: ENST00000366858.7

CNIH4-203, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3 BASIC

Gene CNIH4, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-203ENST00000366858 NISCHQ9Y2I1 1504 aa49.02■■■■■ 5.44
CNIH4-203ENST00000366858 CCDC180Q9P1Z9 1646 aa43.58■■■■■ 4.57
CNIH4-203ENST00000366858 ABCC9O60706 1549 aa42.71■■■■■ 4.43
CNIH4-203ENST00000366858 DCAF8L2P0C7V8 631 aa41.12■■■■■ 4.17
CNIH4-203ENST00000366858 RB1CC1Q8TDY2 1594 aa41.07■■■■■ 4.16
CNIH4-203ENST00000366858 NACADO15069 1562 aa40.99■■■■■ 4.15
CNIH4-203ENST00000366858 ZCCHC6Q5VYS8 1495 aaKnown RBP40.82■■■■■ 4.12
CNIH4-203ENST00000366858 MYO15BQ96JP2 1530 aa40.68■■■■■ 4.1
CNIH4-203ENST00000366858 DCAF1Q9Y4B6 1507 aa40.52■■■■■ 4.08
CNIH4-203ENST00000366858 UNC13AQ9UPW8 1703 aa40.08■■■■■ 4.01
CNIH4-203ENST00000366858 PABPN1Q86U42 306 aaKnown RBP eCLIP39.93■■■■□ 3.98
CNIH4-203ENST00000366858 SCRIBQ14160 1630 aa39.83■■■■□ 3.97
CNIH4-203ENST00000366858 BICRAQ9NZM4 1560 aa39.76■■■■□ 3.95
CNIH4-203ENST00000366858 SHROOM4Q9ULL8 1493 aa39.36■■■■□ 3.89
CNIH4-203ENST00000366858 DNAJC5BQ9UF47 199 aa39.15■■■■□ 3.86
CNIH4-203ENST00000366858 EIF4G1Q04637 1599 aaKnown RBP38.75■■■■□ 3.79
CNIH4-203ENST00000366858 CC2D2AQ9P2K1 1620 aa38.6■■■■□ 3.77
CNIH4-203ENST00000366858 CECR2Q9BXF3 1484 aa38.37■■■■□ 3.73
CNIH4-203ENST00000366858 SMARCA4P51532 1647 aa38.05■■■■□ 3.68
CNIH4-203ENST00000366858 BAZ1AQ9NRL2 1556 aaPredicted RBP38.02■■■■□ 3.68
CNIH4-203ENST00000366858 ATAD2BQ9ULI0 1458 aa37.84■■■■□ 3.65
CNIH4-203ENST00000366858 SMARCA2P51531 1590 aa37.81■■■■□ 3.64
CNIH4-203ENST00000366858 NCAPD3P42695 1498 aa37.8■■■■□ 3.64
CNIH4-203ENST00000366858 MROH2BQ7Z745 1585 aa37.78■■■■□ 3.64
CNIH4-203ENST00000366858 HMGXB3Q12766 1538 aa37.63■■■■□ 3.61
CNIH4-203ENST00000366858 PEG3Q9GZU2 1588 aa37.63■■■■□ 3.61
CNIH4-203ENST00000366858 BAZ1BQ9UIG0 1483 aaKnown RBP37.58■■■■□ 3.61
CNIH4-203ENST00000366858 WIZO95785 1651 aa37.39■■■■□ 3.58
CNIH4-203ENST00000366858 RSF1Q96T23 1441 aaPredicted RBP37.35■■■■□ 3.57
CNIH4-203ENST00000366858 TOP2AP11388 1531 aaKnown RBP36.99■■■■□ 3.51
CNIH4-203ENST00000366858 NESP48681 1621 aa36.94■■■■□ 3.5
CNIH4-203ENST00000366858 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
CNIH4-203ENST00000366858 LAMC3Q9Y6N6 1575 aa36.83■■■■□ 3.49
CNIH4-203ENST00000366858 CADPSQ9ULU8 1353 aa36.73■■■■□ 3.47
CNIH4-203ENST00000366858 PDS5BQ9NTI5 1447 aa36.62■■■■□ 3.45
CNIH4-203ENST00000366858 CCDC88BA6NC98 1476 aa36.56■■■■□ 3.44
CNIH4-203ENST00000366858 SUPT5HO00267 1087 aaKnown RBP36.51■■■■□ 3.44
CNIH4-203ENST00000366858 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
CNIH4-203ENST00000366858 CFTRP13569 1480 aa36.49■■■■□ 3.43
CNIH4-203ENST00000366858 CUX2O14529 1486 aa36.4■■■■□ 3.42
CNIH4-203ENST00000366858 THOC2Q8NI27 1593 aaKnown RBP36.35■■■■□ 3.41
CNIH4-203ENST00000366858 FANCD2Q9BXW9 1451 aa36.33■■■■□ 3.41
CNIH4-203ENST00000366858 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
CNIH4-203ENST00000366858 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
CNIH4-203ENST00000366858 PRDM2Q13029 1718 aa36.21■■■■□ 3.39
CNIH4-203ENST00000366858 WDR62O43379 1518 aa36.08■■■■□ 3.37
CNIH4-203ENST00000366858 URB2Q14146 1524 aaKnown RBP35.94■■■■□ 3.34
CNIH4-203ENST00000366858 ABCC8Q09428 1581 aa35.74■■■■□ 3.31
CNIH4-203ENST00000366858 TOPBP1Q92547 1522 aa35.73■■■■□ 3.31
CNIH4-203ENST00000366858 DNMBPQ6XZF7 1577 aa35.69■■■■□ 3.3
CNIH4-203ENST00000366858 IFT140Q96RY7 1462 aa35.52■■■■□ 3.28
CNIH4-203ENST00000366858 CUX1P39880 1505 aa35.45■■■■□ 3.27
CNIH4-203ENST00000366858 POLA1P09884 1462 aaPredicted RBP35.42■■■■□ 3.26
CNIH4-203ENST00000366858 FGD5Q6ZNL6 1462 aa35.35■■■■□ 3.25
CNIH4-203ENST00000366858 ZNF608Q9ULD9 1512 aaPredicted RBP35.35■■■■□ 3.25
CNIH4-203ENST00000366858 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
CNIH4-203ENST00000366858 SOGA1O94964 1423 aa35.31■■■■□ 3.24
CNIH4-203ENST00000366858 DNAJC5Q9H3Z4 198 aa35.29■■■■□ 3.24
CNIH4-203ENST00000366858 RAD54L2Q9Y4B4 1467 aa35.29■■■■□ 3.24
CNIH4-203ENST00000366858 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
CNIH4-203ENST00000366858 EIF4G3O43432 1585 aaKnown RBP35.22■■■■□ 3.23
CNIH4-203ENST00000366858 AQRO60306 1485 aaKnown RBP eCLIP35.17■■■■□ 3.22
CNIH4-203ENST00000366858 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
CNIH4-203ENST00000366858 SYNJ1O43426 1573 aa35.14■■■■□ 3.22
CNIH4-203ENST00000366858 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
CNIH4-203ENST00000366858 TDRD9Q8NDG6 1382 aaKnown RBP35.12■■■■□ 3.21
CNIH4-203ENST00000366858 WDR97A6NE52 1622 aa35.04■■■■□ 3.2
CNIH4-203ENST00000366858 ABCA10Q8WWZ4 1543 aa34.98■■■■□ 3.19
CNIH4-203ENST00000366858 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
CNIH4-203ENST00000366858 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
CNIH4-203ENST00000366858 GRIN2BQ13224 1484 aa34.89■■■■□ 3.18
CNIH4-203ENST00000366858 SNAPC4Q5SXM2 1469 aa34.85■■■■□ 3.17
CNIH4-203ENST00000366858 FBLN2P98095 1184 aa34.85■■■■□ 3.17
CNIH4-203ENST00000366858 ABCA5Q8WWZ7 1642 aa34.84■■■■□ 3.17
CNIH4-203ENST00000366858 PBRM1Q86U86 1689 aa34.82■■■■□ 3.16
CNIH4-203ENST00000366858 MAGI1Q96QZ7 1491 aaPredicted RBP34.79■■■■□ 3.16
CNIH4-203ENST00000366858 CHD1O14646 1710 aa34.78■■■■□ 3.16
CNIH4-203ENST00000366858 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
CNIH4-203ENST00000366858 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
CNIH4-203ENST00000366858 ERICH3Q5RHP9 1530 aa34.58■■■■□ 3.13
CNIH4-203ENST00000366858 ADAMTS12P58397 1594 aa34.53■■■■□ 3.12
CNIH4-203ENST00000366858 KIF27Q86VH2 1401 aa34.53■■■■□ 3.12
CNIH4-203ENST00000366858 FHAD1B1AJZ9 1412 aa34.48■■■■□ 3.11
CNIH4-203ENST00000366858 TRIM41Q8WV44 630 aa34.47■■■■□ 3.11
CNIH4-203ENST00000366858 GRIN2AQ12879 1464 aa34.44■■■■□ 3.1
CNIH4-203ENST00000366858 CLASP1Q7Z460 1538 aa34.37■■■■□ 3.09
CNIH4-203ENST00000366858 IGF1RP08069 1367 aa34.35■■■■□ 3.09
CNIH4-203ENST00000366858 RIMBP3CA6NJZ7 1639 aa34.34■■■■□ 3.09
CNIH4-203ENST00000366858 RIMBP3BA6NNM3 1639 aa34.34■■■■□ 3.09
CNIH4-203ENST00000366858 RIMBP3Q9UFD9 1639 aa34.34■■■■□ 3.09
CNIH4-203ENST00000366858 ARHGEF11O15085 1522 aa34.34■■■■□ 3.09
CNIH4-203ENST00000366858 CUL7Q14999 1698 aa34.28■■■■□ 3.08
CNIH4-203ENST00000366858 CEP170Q5SW79 1584 aa34.25■■■■□ 3.07
CNIH4-203ENST00000366858 NUP160Q12769 1436 aa34.25■■■■□ 3.07
CNIH4-203ENST00000366858 CARMIL1Q5VZK9 1371 aa34.17■■■■□ 3.06
CNIH4-203ENST00000366858 RUSC2Q8N2Y8 1516 aa34.17■■■■□ 3.06
CNIH4-203ENST00000366858 CYB5RLQ6IPT4 315 aa34.08■■■■□ 3.05
CNIH4-203ENST00000366858 ARAP1Q96P48 1450 aa34.05■■■■□ 3.04
CNIH4-203ENST00000366858 SHROOM2Q13796 1616 aa33.98■■■■□ 3.03
CNIH4-203ENST00000366858 CHIC1Q5VXU3 224 aa33.98■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms