Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MRPL20P1-201ENST00000400819 433 ntBASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AC107918.2-201ENST00000530817 355 ntBASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AL662844.1-201ENST00000546340 181 ntBASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MPDU1-223ENST00000582151 728 ntBASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AL662844.4-201ENST00000606367 2838 ntBASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 HLA-A-201ENST00000376802 1334 ntBASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PCDHB19P-201ENST00000570871 2371 ntBASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PMS2P1-201ENST00000431037 1228 ntBASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AC013467.2-201ENST00000605472 835 ntBASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
TRIM6-TRIM34B2RNG4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM6-TRIM34B2RNG4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms