RNA–Protein interactions for RNA: ENST00000390243.2

IGKV4-1-201, Transcript of immunoglobulin kappa variable 4-1, humanhuman

APPRIS P1 BASIC

Gene IGKV4-1, Length 538 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV4-1-201ENST00000390243 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
IGKV4-1-201ENST00000390243 CCDC180Q9P1Z9 1646 aa37.75■■■■□ 3.63
IGKV4-1-201ENST00000390243 ABCC9O60706 1549 aa37.07■■■■□ 3.53
IGKV4-1-201ENST00000390243 RB1CC1Q8TDY2 1594 aa35.5■■■■□ 3.27
IGKV4-1-201ENST00000390243 NACADO15069 1562 aa35.41■■■■□ 3.26
IGKV4-1-201ENST00000390243 ZCCHC6Q5VYS8 1495 aaKnown RBP35.33■■■■□ 3.25
IGKV4-1-201ENST00000390243 DCAF8L2P0C7V8 631 aa35.22■■■■□ 3.23
IGKV4-1-201ENST00000390243 MYO15BQ96JP2 1530 aa35.11■■■■□ 3.21
IGKV4-1-201ENST00000390243 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
IGKV4-1-201ENST00000390243 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
IGKV4-1-201ENST00000390243 BICRAQ9NZM4 1560 aa34.64■■■■□ 3.14
IGKV4-1-201ENST00000390243 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
IGKV4-1-201ENST00000390243 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
IGKV4-1-201ENST00000390243 DNAJC5BQ9UF47 199 aa34.15■■■■□ 3.06
IGKV4-1-201ENST00000390243 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
IGKV4-1-201ENST00000390243 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
IGKV4-1-201ENST00000390243 CC2D2AQ9P2K1 1620 aa33.55■■■□□ 2.96
IGKV4-1-201ENST00000390243 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
IGKV4-1-201ENST00000390243 SMARCA4P51532 1647 aa32.96■■■□□ 2.87
IGKV4-1-201ENST00000390243 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
IGKV4-1-201ENST00000390243 ATAD2BQ9ULI0 1458 aa32.74■■■□□ 2.83
IGKV4-1-201ENST00000390243 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
IGKV4-1-201ENST00000390243 NCAPD3P42695 1498 aa32.67■■■□□ 2.82
IGKV4-1-201ENST00000390243 SMARCA2P51531 1590 aa32.62■■■□□ 2.81
IGKV4-1-201ENST00000390243 PEG3Q9GZU2 1588 aa32.59■■■□□ 2.81
IGKV4-1-201ENST00000390243 HMGXB3Q12766 1538 aa32.57■■■□□ 2.8
IGKV4-1-201ENST00000390243 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
IGKV4-1-201ENST00000390243 WIZO95785 1651 aa32.41■■■□□ 2.78
IGKV4-1-201ENST00000390243 RSF1Q96T23 1441 aaPredicted RBP32.22■■■□□ 2.75
IGKV4-1-201ENST00000390243 NESP48681 1621 aa32.11■■■□□ 2.73
IGKV4-1-201ENST00000390243 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
IGKV4-1-201ENST00000390243 LAMC3Q9Y6N6 1575 aa31.86■■■□□ 2.69
IGKV4-1-201ENST00000390243 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
IGKV4-1-201ENST00000390243 KIF21AQ7Z4S6 1674 aa31.78■■■□□ 2.68
IGKV4-1-201ENST00000390243 THOC2Q8NI27 1593 aaKnown RBP31.69■■■□□ 2.66
IGKV4-1-201ENST00000390243 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
IGKV4-1-201ENST00000390243 CCDC88BA6NC98 1476 aa31.56■■■□□ 2.64
IGKV4-1-201ENST00000390243 CUX2O14529 1486 aa31.53■■■□□ 2.64
IGKV4-1-201ENST00000390243 CFTRP13569 1480 aa31.53■■■□□ 2.64
IGKV4-1-201ENST00000390243 PDS5BQ9NTI5 1447 aa31.51■■■□□ 2.64
IGKV4-1-201ENST00000390243 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
IGKV4-1-201ENST00000390243 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
IGKV4-1-201ENST00000390243 CEP164Q9UPV0 1460 aa31.36■■■□□ 2.61
IGKV4-1-201ENST00000390243 MRC2Q9UBG0 1479 aa31.35■■■□□ 2.61
IGKV4-1-201ENST00000390243 WDR62O43379 1518 aa31.32■■■□□ 2.6
IGKV4-1-201ENST00000390243 SUPT5HO00267 1087 aaKnown RBP31.2■■■□□ 2.59
IGKV4-1-201ENST00000390243 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
IGKV4-1-201ENST00000390243 TOPBP1Q92547 1522 aa30.93■■■□□ 2.54
IGKV4-1-201ENST00000390243 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
IGKV4-1-201ENST00000390243 CUX1P39880 1505 aa30.72■■■□□ 2.51
IGKV4-1-201ENST00000390243 ZNF608Q9ULD9 1512 aaPredicted RBP30.7■■■□□ 2.51
IGKV4-1-201ENST00000390243 ABCC8Q09428 1581 aa30.69■■■□□ 2.5
IGKV4-1-201ENST00000390243 TARBP1Q13395 1621 aaKnown RBP30.67■■■□□ 2.5
IGKV4-1-201ENST00000390243 POLA1P09884 1462 aaPredicted RBP30.67■■■□□ 2.5
IGKV4-1-201ENST00000390243 IFT140Q96RY7 1462 aa30.65■■■□□ 2.5
IGKV4-1-201ENST00000390243 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
IGKV4-1-201ENST00000390243 EIF4G3O43432 1585 aaKnown RBP30.61■■■□□ 2.49
IGKV4-1-201ENST00000390243 FGD5Q6ZNL6 1462 aa30.57■■■□□ 2.48
IGKV4-1-201ENST00000390243 RAD54L2Q9Y4B4 1467 aa30.56■■■□□ 2.48
IGKV4-1-201ENST00000390243 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
IGKV4-1-201ENST00000390243 SYNJ1O43426 1573 aa30.45■■■□□ 2.47
IGKV4-1-201ENST00000390243 AQRO60306 1485 aaKnown RBP eCLIP30.42■■■□□ 2.46
IGKV4-1-201ENST00000390243 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
IGKV4-1-201ENST00000390243 SOGA1O94964 1423 aa30.39■■■□□ 2.46
IGKV4-1-201ENST00000390243 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
IGKV4-1-201ENST00000390243 WRNQ14191 1432 aaPredicted RBP eCLIP30.32■■■□□ 2.44
IGKV4-1-201ENST00000390243 TDRD9Q8NDG6 1382 aaKnown RBP30.31■■■□□ 2.44
IGKV4-1-201ENST00000390243 CHD1O14646 1710 aa30.27■■■□□ 2.44
IGKV4-1-201ENST00000390243 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
IGKV4-1-201ENST00000390243 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
IGKV4-1-201ENST00000390243 ABCA10Q8WWZ4 1543 aa30.22■■■□□ 2.43
IGKV4-1-201ENST00000390243 SNAPC4Q5SXM2 1469 aa30.19■■■□□ 2.42
IGKV4-1-201ENST00000390243 GAPVD1Q14C86 1478 aa30.1■■■□□ 2.41
IGKV4-1-201ENST00000390243 GRIN2BQ13224 1484 aa30.09■■■□□ 2.41
IGKV4-1-201ENST00000390243 OSCARQ8IYS5 282 aa30.04■■■□□ 2.4
IGKV4-1-201ENST00000390243 MAGI1Q96QZ7 1491 aaPredicted RBP30.03■■■□□ 2.4
IGKV4-1-201ENST00000390243 ADAMTS12P58397 1594 aa29.95■■■□□ 2.39
IGKV4-1-201ENST00000390243 SYNJ2O15056 1496 aa29.93■■■□□ 2.38
IGKV4-1-201ENST00000390243 FBLN2P98095 1184 aa29.91■■■□□ 2.38
IGKV4-1-201ENST00000390243 RIMBP3CA6NJZ7 1639 aa29.91■■■□□ 2.38
IGKV4-1-201ENST00000390243 RIMBP3BA6NNM3 1639 aa29.91■■■□□ 2.38
IGKV4-1-201ENST00000390243 RIMBP3Q9UFD9 1639 aa29.91■■■□□ 2.38
IGKV4-1-201ENST00000390243 CLASP1Q7Z460 1538 aa29.88■■■□□ 2.37
IGKV4-1-201ENST00000390243 ARHGEF11O15085 1522 aa29.84■■■□□ 2.37
IGKV4-1-201ENST00000390243 ERICH3Q5RHP9 1530 aa29.83■■■□□ 2.37
IGKV4-1-201ENST00000390243 GRIN2AQ12879 1464 aa29.77■■■□□ 2.36
IGKV4-1-201ENST00000390243 CHMP7Q8WUX9 453 aaPredicted RBP29.76■■■□□ 2.35
IGKV4-1-201ENST00000390243 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
IGKV4-1-201ENST00000390243 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
IGKV4-1-201ENST00000390243 NUP160Q12769 1436 aa29.65■■■□□ 2.34
IGKV4-1-201ENST00000390243 ARAP1Q96P48 1450 aa29.64■■■□□ 2.34
IGKV4-1-201ENST00000390243 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
IGKV4-1-201ENST00000390243 KIF27Q86VH2 1401 aa29.62■■■□□ 2.33
IGKV4-1-201ENST00000390243 CUL7Q14999 1698 aa29.57■■■□□ 2.32
IGKV4-1-201ENST00000390243 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
IGKV4-1-201ENST00000390243 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
IGKV4-1-201ENST00000390243 IGF1RP08069 1367 aa29.56■■■□□ 2.32
IGKV4-1-201ENST00000390243 SHROOM2Q13796 1616 aa29.52■■■□□ 2.32
IGKV4-1-201ENST00000390243 CYB5RLQ6IPT4 315 aa29.38■■■□□ 2.29
IGKV4-1-201ENST00000390243 CARMIL1Q5VZK9 1371 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms