Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC41.42■■■■■ 4.22
TRIM6-TRIM34B2RNG4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
TRIM6-TRIM34B2RNG4 AL356512.1-201ENST00000607453 1739 ntBASIC40.55■■■■■ 4.08
TRIM6-TRIM34B2RNG4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC40.44■■■■■ 4.06
TRIM6-TRIM34B2RNG4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC40.13■■■■■ 4.01
TRIM6-TRIM34B2RNG4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC40.07■■■■■ 4.01
TRIM6-TRIM34B2RNG4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
TRIM6-TRIM34B2RNG4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC39.84■■■■□ 3.97
TRIM6-TRIM34B2RNG4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC39.76■■■■□ 3.96
TRIM6-TRIM34B2RNG4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC39.42■■■■□ 3.9
TRIM6-TRIM34B2RNG4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC39.38■■■■□ 3.89
TRIM6-TRIM34B2RNG4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC39.36■■■■□ 3.89
TRIM6-TRIM34B2RNG4 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC38.83■■■■□ 3.81
TRIM6-TRIM34B2RNG4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
TRIM6-TRIM34B2RNG4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC38.77■■■■□ 3.8
TRIM6-TRIM34B2RNG4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.56■■■■□ 3.76
TRIM6-TRIM34B2RNG4 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC38.24■■■■□ 3.71
TRIM6-TRIM34B2RNG4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC38.23■■■■□ 3.71
TRIM6-TRIM34B2RNG4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC38.22■■■■□ 3.71
TRIM6-TRIM34B2RNG4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC38.22■■■■□ 3.71
TRIM6-TRIM34B2RNG4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
TRIM6-TRIM34B2RNG4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC38.08■■■■□ 3.69
TRIM6-TRIM34B2RNG4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC37.98■■■■□ 3.67
TRIM6-TRIM34B2RNG4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC37.97■■■■□ 3.67
TRIM6-TRIM34B2RNG4 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
TRIM6-TRIM34B2RNG4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC37.96■■■■□ 3.67
TRIM6-TRIM34B2RNG4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.89■■■■□ 3.66
TRIM6-TRIM34B2RNG4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC37.84■■■■□ 3.65
TRIM6-TRIM34B2RNG4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
TRIM6-TRIM34B2RNG4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC37.63■■■■□ 3.61
TRIM6-TRIM34B2RNG4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
TRIM6-TRIM34B2RNG4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC37.42■■■■□ 3.58
TRIM6-TRIM34B2RNG4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.41■■■■□ 3.58
TRIM6-TRIM34B2RNG4 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
TRIM6-TRIM34B2RNG4 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
TRIM6-TRIM34B2RNG4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC37.19■■■■□ 3.54
TRIM6-TRIM34B2RNG4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
TRIM6-TRIM34B2RNG4 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC37.09■■■■□ 3.53
TRIM6-TRIM34B2RNG4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
TRIM6-TRIM34B2RNG4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC37.07■■■■□ 3.52
TRIM6-TRIM34B2RNG4 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC37.02■■■■□ 3.52
TRIM6-TRIM34B2RNG4 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
TRIM6-TRIM34B2RNG4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
TRIM6-TRIM34B2RNG4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC36.78■■■■□ 3.48
TRIM6-TRIM34B2RNG4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
TRIM6-TRIM34B2RNG4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
TRIM6-TRIM34B2RNG4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
TRIM6-TRIM34B2RNG4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC36.68■■■■□ 3.46
TRIM6-TRIM34B2RNG4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC36.67■■■■□ 3.46
TRIM6-TRIM34B2RNG4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC36.65■■■■□ 3.46
TRIM6-TRIM34B2RNG4 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36.58■■■■□ 3.45
TRIM6-TRIM34B2RNG4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC36.56■■■■□ 3.44
TRIM6-TRIM34B2RNG4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC36.56■■■■□ 3.44
TRIM6-TRIM34B2RNG4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC36.55■■■■□ 3.44
TRIM6-TRIM34B2RNG4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC36.51■■■■□ 3.44
TRIM6-TRIM34B2RNG4 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
TRIM6-TRIM34B2RNG4 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC36.43■■■■□ 3.42
TRIM6-TRIM34B2RNG4 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC36.36■■■■□ 3.41
TRIM6-TRIM34B2RNG4 ILK-212ENST00000532063 1617 ntTSL 2 BASIC36.36■■■■□ 3.41
TRIM6-TRIM34B2RNG4 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
TRIM6-TRIM34B2RNG4 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.27■■■■□ 3.4
TRIM6-TRIM34B2RNG4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC36.25■■■■□ 3.39
TRIM6-TRIM34B2RNG4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
TRIM6-TRIM34B2RNG4 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.18■■■■□ 3.38
TRIM6-TRIM34B2RNG4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
TRIM6-TRIM34B2RNG4 AC015813.7-201ENST00000623294 581 ntBASIC36.11■■■■□ 3.37
TRIM6-TRIM34B2RNG4 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
TRIM6-TRIM34B2RNG4 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC36.02■■■■□ 3.36
TRIM6-TRIM34B2RNG4 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
TRIM6-TRIM34B2RNG4 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36■■■■□ 3.35
TRIM6-TRIM34B2RNG4 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
TRIM6-TRIM34B2RNG4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC35.91■■■■□ 3.34
TRIM6-TRIM34B2RNG4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
TRIM6-TRIM34B2RNG4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
TRIM6-TRIM34B2RNG4 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
TRIM6-TRIM34B2RNG4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC35.81■■■■□ 3.32
TRIM6-TRIM34B2RNG4 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.79■■■■□ 3.32
TRIM6-TRIM34B2RNG4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35.71■■■■□ 3.31
TRIM6-TRIM34B2RNG4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
TRIM6-TRIM34B2RNG4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
TRIM6-TRIM34B2RNG4 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
TRIM6-TRIM34B2RNG4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.6■■■■□ 3.29
TRIM6-TRIM34B2RNG4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
TRIM6-TRIM34B2RNG4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
TRIM6-TRIM34B2RNG4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC35.52■■■■□ 3.28
TRIM6-TRIM34B2RNG4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
TRIM6-TRIM34B2RNG4 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
TRIM6-TRIM34B2RNG4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC35.46■■■■□ 3.27
TRIM6-TRIM34B2RNG4 AC145285.7-201ENST00000614819 1539 ntBASIC35.45■■■■□ 3.27
TRIM6-TRIM34B2RNG4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
TRIM6-TRIM34B2RNG4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
TRIM6-TRIM34B2RNG4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
TRIM6-TRIM34B2RNG4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
TRIM6-TRIM34B2RNG4 AC006077.2-201ENST00000623591 457 ntBASIC35.31■■■■□ 3.24
TRIM6-TRIM34B2RNG4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
TRIM6-TRIM34B2RNG4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
TRIM6-TRIM34B2RNG4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC35.24■■■■□ 3.23
TRIM6-TRIM34B2RNG4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.24■■■■□ 3.23
TRIM6-TRIM34B2RNG4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
TRIM6-TRIM34B2RNG4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms