Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.79□□□□□ -0.04
ATF1P18846 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.79□□□□□ -0.04
ATF1P18846 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.79□□□□□ -0.04
ATF1P18846 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.79□□□□□ -0.04
ATF1P18846 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.79□□□□□ -0.04
ATF1P18846 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.79□□□□□ -0.04
ATF1P18846 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATF1P18846 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.78□□□□□ -0.04
ATF1P18846 INTS4P1-201ENST00000438455 1935 ntBASIC14.78□□□□□ -0.04
ATF1P18846 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ATF1P18846 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ATF1P18846 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ATF1P18846 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.78□□□□□ -0.04
ATF1P18846 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.78□□□□□ -0.04
ATF1P18846 DRAXINP1-201ENST00000437611 948 ntBASIC14.78□□□□□ -0.04
ATF1P18846 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 KRT18P21-201ENST00000515767 1272 ntBASIC14.78□□□□□ -0.04
ATF1P18846 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.78□□□□□ -0.04
ATF1P18846 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.78□□□□□ -0.04
ATF1P18846 AL049597.2-201ENST00000565575 961 ntBASIC14.78□□□□□ -0.04
ATF1P18846 AC116407.4-201ENST00000623319 1061 ntBASIC14.78□□□□□ -0.04
ATF1P18846 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ATF1P18846 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.78□□□□□ -0.04
ATF1P18846 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ATF1P18846 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ATF1P18846 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATF1P18846 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ATF1P18846 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.77□□□□□ -0.04
ATF1P18846 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.77□□□□□ -0.04
ATF1P18846 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
ATF1P18846 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ATF1P18846 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.77□□□□□ -0.04
ATF1P18846 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ATF1P18846 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
ATF1P18846 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATF1P18846 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.77□□□□□ -0.05
ATF1P18846 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ATF1P18846 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ATF1P18846 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms