RNA–Protein interactions for RNA: ENST00000397323.8

RBPMS-204, Transcript of RNA binding protein, mRNA processing factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBPMS, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBPMS-204ENST00000397323 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
RBPMS-204ENST00000397323 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
RBPMS-204ENST00000397323 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
RBPMS-204ENST00000397323 SHROOM4Q9ULL8 1493 aa29.07■■■□□ 2.24
RBPMS-204ENST00000397323 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
RBPMS-204ENST00000397323 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
RBPMS-204ENST00000397323 SUPT5HO00267 1087 aaKnown RBP28.29■■■□□ 2.12
RBPMS-204ENST00000397323 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
RBPMS-204ENST00000397323 ABCC9O60706 1549 aa27.72■■■□□ 2.03
RBPMS-204ENST00000397323 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
RBPMS-204ENST00000397323 NACADO15069 1562 aa27.45■■□□□ 1.98
RBPMS-204ENST00000397323 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
RBPMS-204ENST00000397323 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
RBPMS-204ENST00000397323 RB1CC1Q8TDY2 1594 aa27.08■■□□□ 1.93
RBPMS-204ENST00000397323 CECR2Q9BXF3 1484 aa26.97■■□□□ 1.91
RBPMS-204ENST00000397323 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
RBPMS-204ENST00000397323 PELP1Q8IZL8 1130 aaKnown RBP26.77■■□□□ 1.88
RBPMS-204ENST00000397323 UNC13AQ9UPW8 1703 aa26.7■■□□□ 1.87
RBPMS-204ENST00000397323 WIZO95785 1651 aa26.67■■□□□ 1.86
RBPMS-204ENST00000397323 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
RBPMS-204ENST00000397323 HRCP23327 699 aa26.55■■□□□ 1.84
RBPMS-204ENST00000397323 LOC105371045A0A1W2PR82 267 aa26.5■■□□□ 1.83
RBPMS-204ENST00000397323 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
RBPMS-204ENST00000397323 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
RBPMS-204ENST00000397323 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.82
RBPMS-204ENST00000397323 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
RBPMS-204ENST00000397323 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.82
RBPMS-204ENST00000397323 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
RBPMS-204ENST00000397323 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
RBPMS-204ENST00000397323 EIF4G1Q04637 1599 aaKnown RBP26.15■■□□□ 1.78
RBPMS-204ENST00000397323 FAM9AQ8IZU1 332 aaPredicted RBP26.14■■□□□ 1.77
RBPMS-204ENST00000397323 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
RBPMS-204ENST00000397323 SMARCA2P51531 1590 aa26.1■■□□□ 1.77
RBPMS-204ENST00000397323 MYT1Q01538 1121 aa26.02■■□□□ 1.76
RBPMS-204ENST00000397323 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
RBPMS-204ENST00000397323 ABCC8Q09428 1581 aa25.91■■□□□ 1.74
RBPMS-204ENST00000397323 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
RBPMS-204ENST00000397323 ATAD2BQ9ULI0 1458 aa25.83■■□□□ 1.72
RBPMS-204ENST00000397323 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
RBPMS-204ENST00000397323 TRIM26Q12899 539 aaPredicted RBP25.63■■□□□ 1.69
RBPMS-204ENST00000397323 SOGA1O94964 1423 aa25.58■■□□□ 1.69
RBPMS-204ENST00000397323 WRNQ14191 1432 aaPredicted RBP eCLIP25.51■■□□□ 1.68
RBPMS-204ENST00000397323 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
RBPMS-204ENST00000397323 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
RBPMS-204ENST00000397323 NCAPD3P42695 1498 aa25.4■■□□□ 1.66
RBPMS-204ENST00000397323 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.65
RBPMS-204ENST00000397323 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
RBPMS-204ENST00000397323 CSRNP3Q8WYN3 585 aa25.36■■□□□ 1.65
RBPMS-204ENST00000397323 EEA1Q15075 1411 aa25.35■■□□□ 1.65
RBPMS-204ENST00000397323 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
RBPMS-204ENST00000397323 TNIKQ9UKE5 1360 aa25.23■■□□□ 1.63
RBPMS-204ENST00000397323 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
RBPMS-204ENST00000397323 GOLGA3Q08378 1498 aa25.16■■□□□ 1.62
RBPMS-204ENST00000397323 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
RBPMS-204ENST00000397323 ZEB1P37275 1124 aaPredicted RBP25.09■■□□□ 1.61
RBPMS-204ENST00000397323 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
RBPMS-204ENST00000397323 CFTRP13569 1480 aa25.08■■□□□ 1.61
RBPMS-204ENST00000397323 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
RBPMS-204ENST00000397323 KIF21BO75037 1637 aa25.06■■□□□ 1.6
RBPMS-204ENST00000397323 CUX1P39880 1505 aa25.02■■□□□ 1.6
RBPMS-204ENST00000397323 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
RBPMS-204ENST00000397323 RAPGEF2Q9Y4G8 1499 aa24.97■■□□□ 1.59
RBPMS-204ENST00000397323 TTBK1Q5TCY1 1321 aaPredicted RBP24.96■■□□□ 1.59
RBPMS-204ENST00000397323 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
RBPMS-204ENST00000397323 PRDM2Q13029 1718 aa24.87■■□□□ 1.57
RBPMS-204ENST00000397323 CLIP1P30622 1438 aa24.86■■□□□ 1.57
RBPMS-204ENST00000397323 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
RBPMS-204ENST00000397323 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
RBPMS-204ENST00000397323 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
RBPMS-204ENST00000397323 ERICH3Q5RHP9 1530 aa24.73■■□□□ 1.55
RBPMS-204ENST00000397323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.7■■□□□ 1.54
RBPMS-204ENST00000397323 VPS8Q8N3P4 1428 aa24.7■■□□□ 1.54
RBPMS-204ENST00000397323 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
RBPMS-204ENST00000397323 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
RBPMS-204ENST00000397323 CUX2O14529 1486 aa24.62■■□□□ 1.53
RBPMS-204ENST00000397323 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
RBPMS-204ENST00000397323 NESP48681 1621 aa24.6■■□□□ 1.53
RBPMS-204ENST00000397323 IGF1RP08069 1367 aa24.55■■□□□ 1.52
RBPMS-204ENST00000397323 ARAP1Q96P48 1450 aa24.54■■□□□ 1.52
RBPMS-204ENST00000397323 APLP2Q06481 763 aa24.5■■□□□ 1.51
RBPMS-204ENST00000397323 DNAJC5BQ9UF47 199 aa24.49■■□□□ 1.51
RBPMS-204ENST00000397323 ACIN1Q9UKV3 1341 aaKnown RBP24.47■■□□□ 1.51
RBPMS-204ENST00000397323 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
RBPMS-204ENST00000397323 NEUROD1Q13562 356 aa24.45■■□□□ 1.5
RBPMS-204ENST00000397323 TOPBP1Q92547 1522 aa24.43■■□□□ 1.5
RBPMS-204ENST00000397323 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
RBPMS-204ENST00000397323 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
RBPMS-204ENST00000397323 ARHGAP35Q9NRY4 1499 aa24.4■■□□□ 1.5
RBPMS-204ENST00000397323 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
RBPMS-204ENST00000397323 LAMC3Q9Y6N6 1575 aa24.38■■□□□ 1.49
RBPMS-204ENST00000397323 HNRNPUL2Q1KMD3 747 aaKnown RBP24.37■■□□□ 1.49
RBPMS-204ENST00000397323 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
RBPMS-204ENST00000397323 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
RBPMS-204ENST00000397323 DIEXFQ68CQ4 756 aaKnown RBP24.34■■□□□ 1.49
RBPMS-204ENST00000397323 KANK4Q5T7N3 995 aaPredicted RBP24.33■■□□□ 1.49
RBPMS-204ENST00000397323 URB2Q14146 1524 aaKnown RBP24.31■■□□□ 1.48
RBPMS-204ENST00000397323 BCL11AQ9H165 835 aa24.24■■□□□ 1.47
RBPMS-204ENST00000397323 PDS5BQ9NTI5 1447 aa24.22■■□□□ 1.47
RBPMS-204ENST00000397323 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
RBPMS-204ENST00000397323 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms