Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL3P19876 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.14□□□□□ -0.15
CXCL3P19876 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.14□□□□□ -0.15
CXCL3P19876 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 CDC14C-201ENST00000428251 1719 ntBASIC14.14□□□□□ -0.15
CXCL3P19876 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CXCL3P19876 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 AL109954.1-202ENST00000564051 2148 ntBASIC14.14□□□□□ -0.15
CXCL3P19876 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCL3P19876 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
CXCL3P19876 AC112698.1-201ENST00000510299 916 ntBASIC14.13□□□□□ -0.15
CXCL3P19876 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.13□□□□□ -0.15
CXCL3P19876 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCL3P19876 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCL3P19876 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCL3P19876 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms