RNA–Protein interactions for RNA: ENST00000588502.5

MRPL4-204, Transcript of mitochondrial ribosomal protein L4, humanhuman

TSL 2 BASIC

Gene MRPL4, Length 827 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-204ENST00000588502 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
MRPL4-204ENST00000588502 CCDC180Q9P1Z9 1646 aa42.36■■■■■ 4.37
MRPL4-204ENST00000588502 ABCC9O60706 1549 aa41.66■■■■■ 4.26
MRPL4-204ENST00000588502 RB1CC1Q8TDY2 1594 aa40■■■■□ 3.99
MRPL4-204ENST00000588502 NACADO15069 1562 aa39.95■■■■□ 3.99
MRPL4-204ENST00000588502 DCAF8L2P0C7V8 631 aa39.92■■■■□ 3.98
MRPL4-204ENST00000588502 MYO15BQ96JP2 1530 aa39.71■■■■□ 3.95
MRPL4-204ENST00000588502 ZCCHC6Q5VYS8 1495 aaKnown RBP39.67■■■■□ 3.94
MRPL4-204ENST00000588502 DCAF1Q9Y4B6 1507 aa39.47■■■■□ 3.91
MRPL4-204ENST00000588502 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
MRPL4-204ENST00000588502 PABPN1Q86U42 306 aaKnown RBP eCLIP38.97■■■■□ 3.83
MRPL4-204ENST00000588502 BICRAQ9NZM4 1560 aa38.82■■■■□ 3.8
MRPL4-204ENST00000588502 SCRIBQ14160 1630 aa38.63■■■■□ 3.77
MRPL4-204ENST00000588502 DNAJC5BQ9UF47 199 aa38.51■■■■□ 3.76
MRPL4-204ENST00000588502 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
MRPL4-204ENST00000588502 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
MRPL4-204ENST00000588502 CC2D2AQ9P2K1 1620 aa37.66■■■■□ 3.62
MRPL4-204ENST00000588502 CECR2Q9BXF3 1484 aa37.47■■■■□ 3.59
MRPL4-204ENST00000588502 SMARCA4P51532 1647 aa36.97■■■■□ 3.51
MRPL4-204ENST00000588502 BAZ1AQ9NRL2 1556 aaPredicted RBP36.94■■■■□ 3.5
MRPL4-204ENST00000588502 NCAPD3P42695 1498 aa36.93■■■■□ 3.5
MRPL4-204ENST00000588502 ATAD2BQ9ULI0 1458 aa36.88■■■■□ 3.5
MRPL4-204ENST00000588502 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
MRPL4-204ENST00000588502 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
MRPL4-204ENST00000588502 PEG3Q9GZU2 1588 aa36.67■■■■□ 3.46
MRPL4-204ENST00000588502 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
MRPL4-204ENST00000588502 BAZ1BQ9UIG0 1483 aaKnown RBP36.53■■■■□ 3.44
MRPL4-204ENST00000588502 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
MRPL4-204ENST00000588502 WIZO95785 1651 aa36.27■■■■□ 3.4
MRPL4-204ENST00000588502 NESP48681 1621 aa36.01■■■■□ 3.36
MRPL4-204ENST00000588502 TOP2AP11388 1531 aaKnown RBP35.9■■■■□ 3.34
MRPL4-204ENST00000588502 ERCC6Q03468 1493 aa35.9■■■■□ 3.34
MRPL4-204ENST00000588502 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
MRPL4-204ENST00000588502 CADPSQ9ULU8 1353 aa35.84■■■■□ 3.33
MRPL4-204ENST00000588502 PDS5BQ9NTI5 1447 aa35.71■■■■□ 3.31
MRPL4-204ENST00000588502 CUX2O14529 1486 aa35.62■■■■□ 3.29
MRPL4-204ENST00000588502 CFTRP13569 1480 aa35.58■■■■□ 3.29
MRPL4-204ENST00000588502 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
MRPL4-204ENST00000588502 KIF21AQ7Z4S6 1674 aa35.48■■■■□ 3.27
MRPL4-204ENST00000588502 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
MRPL4-204ENST00000588502 FANCD2Q9BXW9 1451 aa35.37■■■■□ 3.25
MRPL4-204ENST00000588502 CEP164Q9UPV0 1460 aa35.32■■■■□ 3.24
MRPL4-204ENST00000588502 MRC2Q9UBG0 1479 aa35.31■■■■□ 3.24
MRPL4-204ENST00000588502 SUPT5HO00267 1087 aaKnown RBP35.24■■■■□ 3.23
MRPL4-204ENST00000588502 WDR62O43379 1518 aa35.2■■■■□ 3.23
MRPL4-204ENST00000588502 PRDM2Q13029 1718 aa35.09■■■■□ 3.21
MRPL4-204ENST00000588502 URB2Q14146 1524 aaKnown RBP35.02■■■■□ 3.2
MRPL4-204ENST00000588502 DNAJC5Q9H3Z4 198 aa34.82■■■■□ 3.16
MRPL4-204ENST00000588502 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
MRPL4-204ENST00000588502 TOPBP1Q92547 1522 aa34.78■■■■□ 3.16
MRPL4-204ENST00000588502 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.14
MRPL4-204ENST00000588502 IFT140Q96RY7 1462 aa34.62■■■■□ 3.13
MRPL4-204ENST00000588502 POLA1P09884 1462 aaPredicted RBP34.48■■■■□ 3.11
MRPL4-204ENST00000588502 ZNF608Q9ULD9 1512 aaPredicted RBP34.46■■■■□ 3.11
MRPL4-204ENST00000588502 CUX1P39880 1505 aa34.45■■■■□ 3.11
MRPL4-204ENST00000588502 TARBP1Q13395 1621 aaKnown RBP34.4■■■■□ 3.1
MRPL4-204ENST00000588502 SOGA1O94964 1423 aa34.38■■■■□ 3.09
MRPL4-204ENST00000588502 FGD5Q6ZNL6 1462 aa34.36■■■■□ 3.09
MRPL4-204ENST00000588502 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
MRPL4-204ENST00000588502 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.08
MRPL4-204ENST00000588502 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
MRPL4-204ENST00000588502 OSCARQ8IYS5 282 aa34.2■■■■□ 3.07
MRPL4-204ENST00000588502 TDRD9Q8NDG6 1382 aaKnown RBP34.2■■■■□ 3.07
MRPL4-204ENST00000588502 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.06
MRPL4-204ENST00000588502 WDR97A6NE52 1622 aa34.11■■■■□ 3.05
MRPL4-204ENST00000588502 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
MRPL4-204ENST00000588502 BIVM-ERCC5R4GMW8 1640 aa34.07■■■■□ 3.04
MRPL4-204ENST00000588502 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
MRPL4-204ENST00000588502 ABCA10Q8WWZ4 1543 aa34.05■■■■□ 3.04
MRPL4-204ENST00000588502 GRIN2BQ13224 1484 aa33.96■■■■□ 3.03
MRPL4-204ENST00000588502 GAPVD1Q14C86 1478 aa33.95■■■■□ 3.02
MRPL4-204ENST00000588502 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
MRPL4-204ENST00000588502 FBLN2P98095 1184 aa33.89■■■■□ 3.02
MRPL4-204ENST00000588502 MAGI1Q96QZ7 1491 aaPredicted RBP33.88■■■■□ 3.01
MRPL4-204ENST00000588502 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
MRPL4-204ENST00000588502 CHMP7Q8WUX9 453 aaPredicted RBP33.81■■■■□ 3
MRPL4-204ENST00000588502 CHD1O14646 1710 aa33.79■■■■□ 3
MRPL4-204ENST00000588502 SYNJ2O15056 1496 aa33.76■■■■□ 3
MRPL4-204ENST00000588502 PBRM1Q86U86 1689 aa33.75■■■□□ 2.99
MRPL4-204ENST00000588502 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
MRPL4-204ENST00000588502 FHAD1B1AJZ9 1412 aa33.57■■■□□ 2.96
MRPL4-204ENST00000588502 ARHGEF11O15085 1522 aa33.54■■■□□ 2.96
MRPL4-204ENST00000588502 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
MRPL4-204ENST00000588502 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
MRPL4-204ENST00000588502 RIMBP3CA6NJZ7 1639 aa33.53■■■□□ 2.96
MRPL4-204ENST00000588502 RIMBP3BA6NNM3 1639 aa33.53■■■□□ 2.96
MRPL4-204ENST00000588502 RIMBP3Q9UFD9 1639 aa33.53■■■□□ 2.96
MRPL4-204ENST00000588502 GRIN2AQ12879 1464 aa33.51■■■□□ 2.96
MRPL4-204ENST00000588502 TRIM41Q8WV44 630 aa33.51■■■□□ 2.95
MRPL4-204ENST00000588502 KIF27Q86VH2 1401 aa33.51■■■□□ 2.95
MRPL4-204ENST00000588502 IGF1RP08069 1367 aa33.46■■■□□ 2.95
MRPL4-204ENST00000588502 NUP160Q12769 1436 aa33.41■■■□□ 2.94
MRPL4-204ENST00000588502 CEP170Q5SW79 1584 aa33.32■■■□□ 2.92
MRPL4-204ENST00000588502 CYB5RLQ6IPT4 315 aa33.32■■■□□ 2.92
MRPL4-204ENST00000588502 ARAP1Q96P48 1450 aa33.27■■■□□ 2.92
MRPL4-204ENST00000588502 CUL7Q14999 1698 aa33.22■■■□□ 2.91
MRPL4-204ENST00000588502 CARMIL1Q5VZK9 1371 aa33.21■■■□□ 2.91
MRPL4-204ENST00000588502 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
MRPL4-204ENST00000588502 JPH4Q96JJ6 628 aa33.12■■■□□ 2.89
MRPL4-204ENST00000588502 SHROOM2Q13796 1616 aa33.11■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms