RNA–Protein interactions for RNA: ENST00000394458.7

ANKLE1-201, Transcript of ankyrin repeat and LEM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKLE1, Length 3,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKLE1-201ENST00000394458 NISCHQ9Y2I1 1504 aa29.84■■■□□ 2.37
ANKLE1-201ENST00000394458 SHROOM4Q9ULL8 1493 aa26■■□□□ 1.75
ANKLE1-201ENST00000394458 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
ANKLE1-201ENST00000394458 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
ANKLE1-201ENST00000394458 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
ANKLE1-201ENST00000394458 ZCCHC6Q5VYS8 1495 aaKnown RBP25.07■■□□□ 1.6
ANKLE1-201ENST00000394458 HRCP23327 699 aa25.03■■□□□ 1.6
ANKLE1-201ENST00000394458 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
ANKLE1-201ENST00000394458 PCGF6Q9BYE7 350 aa24.74■■□□□ 1.55
ANKLE1-201ENST00000394458 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
ANKLE1-201ENST00000394458 MYO15BQ96JP2 1530 aa24.44■■□□□ 1.5
ANKLE1-201ENST00000394458 ABCC9O60706 1549 aa24.41■■□□□ 1.5
ANKLE1-201ENST00000394458 LOC105371045A0A1W2PR82 267 aa24.19■■□□□ 1.46
ANKLE1-201ENST00000394458 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
ANKLE1-201ENST00000394458 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
ANKLE1-201ENST00000394458 SCRIBQ14160 1630 aa24.08■■□□□ 1.44
ANKLE1-201ENST00000394458 PELP1Q8IZL8 1130 aaKnown RBP23.99■■□□□ 1.43
ANKLE1-201ENST00000394458 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
ANKLE1-201ENST00000394458 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
ANKLE1-201ENST00000394458 TRIM26Q12899 539 aaPredicted RBP23.74■■□□□ 1.39
ANKLE1-201ENST00000394458 NACADO15069 1562 aa23.62■■□□□ 1.37
ANKLE1-201ENST00000394458 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
ANKLE1-201ENST00000394458 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
ANKLE1-201ENST00000394458 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
ANKLE1-201ENST00000394458 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
ANKLE1-201ENST00000394458 ZEB1P37275 1124 aaPredicted RBP23.46■■□□□ 1.35
ANKLE1-201ENST00000394458 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
ANKLE1-201ENST00000394458 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
ANKLE1-201ENST00000394458 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
ANKLE1-201ENST00000394458 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
ANKLE1-201ENST00000394458 ACIN1Q9UKV3 1341 aaKnown RBP23.13■■□□□ 1.29
ANKLE1-201ENST00000394458 WIZO95785 1651 aa23.1■■□□□ 1.29
ANKLE1-201ENST00000394458 GTF3C3Q9Y5Q9 886 aa23.06■■□□□ 1.28
ANKLE1-201ENST00000394458 MYT1Q01538 1121 aa22.98■■□□□ 1.27
ANKLE1-201ENST00000394458 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
ANKLE1-201ENST00000394458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.95■■□□□ 1.26
ANKLE1-201ENST00000394458 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
ANKLE1-201ENST00000394458 CCER1Q8TC90 406 aaPredicted RBP22.87■■□□□ 1.25
ANKLE1-201ENST00000394458 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
ANKLE1-201ENST00000394458 DIEXFQ68CQ4 756 aaKnown RBP22.82■■□□□ 1.24
ANKLE1-201ENST00000394458 SMARCA4P51532 1647 aa22.76■■□□□ 1.23
ANKLE1-201ENST00000394458 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
ANKLE1-201ENST00000394458 YTHDC1Q96MU7 727 aaKnown RBP22.68■■□□□ 1.22
ANKLE1-201ENST00000394458 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
ANKLE1-201ENST00000394458 RANGAP1P46060 587 aaPredicted RBP22.64■■□□□ 1.21
ANKLE1-201ENST00000394458 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
ANKLE1-201ENST00000394458 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
ANKLE1-201ENST00000394458 UBTFP17480 764 aaKnown RBP22.57■■□□□ 1.2
ANKLE1-201ENST00000394458 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
ANKLE1-201ENST00000394458 BAZ1BQ9UIG0 1483 aaKnown RBP22.42■■□□□ 1.18
ANKLE1-201ENST00000394458 ATAD2BQ9ULI0 1458 aa22.39■■□□□ 1.18
ANKLE1-201ENST00000394458 SOGA1O94964 1423 aa22.37■■□□□ 1.17
ANKLE1-201ENST00000394458 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
ANKLE1-201ENST00000394458 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
ANKLE1-201ENST00000394458 ZNF316A6NFI3 1004 aaPredicted RBP22.31■■□□□ 1.16
ANKLE1-201ENST00000394458 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
ANKLE1-201ENST00000394458 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
ANKLE1-201ENST00000394458 MIER1Q8N108 512 aa22.25■■□□□ 1.15
ANKLE1-201ENST00000394458 EIF4G1Q04637 1599 aaKnown RBP22.25■■□□□ 1.15
ANKLE1-201ENST00000394458 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
ANKLE1-201ENST00000394458 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
ANKLE1-201ENST00000394458 APLP2Q06481 763 aa22.02■■□□□ 1.12
ANKLE1-201ENST00000394458 SYNJ1O43426 1573 aa22■■□□□ 1.11
ANKLE1-201ENST00000394458 EEA1Q15075 1411 aa21.94■■□□□ 1.1
ANKLE1-201ENST00000394458 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
ANKLE1-201ENST00000394458 NCAPD3P42695 1498 aa21.94■■□□□ 1.1
ANKLE1-201ENST00000394458 GOLGA3Q08378 1498 aa21.91■■□□□ 1.1
ANKLE1-201ENST00000394458 SUPT16HQ9Y5B9 1047 aaKnown RBP21.86■■□□□ 1.09
ANKLE1-201ENST00000394458 ITGAEP38570 1179 aa21.85■■□□□ 1.09
ANKLE1-201ENST00000394458 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
ANKLE1-201ENST00000394458 BCL11AQ9H165 835 aa21.78■■□□□ 1.08
ANKLE1-201ENST00000394458 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
ANKLE1-201ENST00000394458 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
ANKLE1-201ENST00000394458 CLIP1P30622 1438 aa21.78■■□□□ 1.08
ANKLE1-201ENST00000394458 HMGXB3Q12766 1538 aa21.77■■□□□ 1.08
ANKLE1-201ENST00000394458 TSHZ2Q9NRE2 1034 aa21.76■■□□□ 1.07
ANKLE1-201ENST00000394458 CFTRP13569 1480 aa21.68■■□□□ 1.06
ANKLE1-201ENST00000394458 CC2D2AQ9P2K1 1620 aa21.68■■□□□ 1.06
ANKLE1-201ENST00000394458 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
ANKLE1-201ENST00000394458 BCANQ96GW7 911 aa21.66■■□□□ 1.06
ANKLE1-201ENST00000394458 CUX1P39880 1505 aa21.66■■□□□ 1.06
ANKLE1-201ENST00000394458 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
ANKLE1-201ENST00000394458 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
ANKLE1-201ENST00000394458 ATP1B4Q9UN42 357 aaPredicted RBP21.63■■□□□ 1.05
ANKLE1-201ENST00000394458 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
ANKLE1-201ENST00000394458 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
ANKLE1-201ENST00000394458 P3H3Q8IVL6 736 aa21.58■■□□□ 1.04
ANKLE1-201ENST00000394458 CUX2O14529 1486 aa21.57■■□□□ 1.04
ANKLE1-201ENST00000394458 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
ANKLE1-201ENST00000394458 KIF21BO75037 1637 aa21.53■■□□□ 1.04
ANKLE1-201ENST00000394458 NESP48681 1621 aa21.53■■□□□ 1.04
ANKLE1-201ENST00000394458 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
ANKLE1-201ENST00000394458 FANCD2Q9BXW9 1451 aa21.47■■□□□ 1.03
ANKLE1-201ENST00000394458 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
ANKLE1-201ENST00000394458 KCNH8Q96L42 1107 aa21.46■■□□□ 1.03
ANKLE1-201ENST00000394458 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
ANKLE1-201ENST00000394458 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
ANKLE1-201ENST00000394458 IGF1RP08069 1367 aa21.4■■□□□ 1.02
ANKLE1-201ENST00000394458 FKBP8Q14318 412 aa21.4■■□□□ 1.02
ANKLE1-201ENST00000394458 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms