Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VPS33AQ96AX1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 AL136038.3-201ENST00000561909 1096 ntBASIC16.24■□□□□ 0.19
VPS33AQ96AX1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS33AQ96AX1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 LINC00554-201ENST00000564841 3011 ntBASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 NUS1P1-201ENST00000446295 882 ntBASIC16.23■□□□□ 0.19
VPS33AQ96AX1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 VENTXP7-201ENST00000475503 772 ntBASIC16.23■□□□□ 0.19
VPS33AQ96AX1 DUX4L17-201ENST00000557360 1267 ntBASIC16.23■□□□□ 0.19
VPS33AQ96AX1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 NTF6B-201ENST00000591913 560 ntBASIC16.23■□□□□ 0.19
VPS33AQ96AX1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS33AQ96AX1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS33AQ96AX1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms