Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 LINC02199-201ENST00000506655 2702 ntBASIC17.8■□□□□ 0.44
CHKAP35790 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 PI4KAP1-204ENST00000612579 1703 ntBASIC17.8■□□□□ 0.44
CHKAP35790 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.8■□□□□ 0.44
CHKAP35790 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHKAP35790 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHKAP35790 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 AC008741.2-201ENST00000612792 3115 ntBASIC17.79■□□□□ 0.44
CHKAP35790 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CHKAP35790 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
CHKAP35790 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CHKAP35790 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CHKAP35790 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.79■□□□□ 0.44
CHKAP35790 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.79■□□□□ 0.44
CHKAP35790 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CHKAP35790 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
CHKAP35790 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
CHKAP35790 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHKAP35790 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHKAP35790 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CHKAP35790 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.78■□□□□ 0.44
CHKAP35790 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.78■□□□□ 0.44
CHKAP35790 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 AC002347.1-201ENST00000569543 541 ntBASIC17.78■□□□□ 0.44
CHKAP35790 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.78■□□□□ 0.44
CHKAP35790 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.78■□□□□ 0.44
CHKAP35790 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
CHKAP35790 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
CHKAP35790 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.78■□□□□ 0.44
CHKAP35790 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CHKAP35790 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms