RNA–Protein interactions for RNA: ENST00000248924.10

GCAT-201, Transcript of glycine C-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCAT, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCAT-201ENST00000248924 NISCHQ9Y2I1 1504 aa41.32■■■■■ 4.2
GCAT-201ENST00000248924 CCDC180Q9P1Z9 1646 aa36.68■■■■□ 3.46
GCAT-201ENST00000248924 ABCC9O60706 1549 aa35.81■■■■□ 3.32
GCAT-201ENST00000248924 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
GCAT-201ENST00000248924 RB1CC1Q8TDY2 1594 aa34.46■■■■□ 3.11
GCAT-201ENST00000248924 ZCCHC6Q5VYS8 1495 aaKnown RBP34.44■■■■□ 3.1
GCAT-201ENST00000248924 NACADO15069 1562 aa34.44■■■■□ 3.1
GCAT-201ENST00000248924 MYO15BQ96JP2 1530 aa34.22■■■■□ 3.07
GCAT-201ENST00000248924 DCAF1Q9Y4B6 1507 aa34.15■■■■□ 3.06
GCAT-201ENST00000248924 UNC13AQ9UPW8 1703 aa33.76■■■□□ 2.99
GCAT-201ENST00000248924 SCRIBQ14160 1630 aa33.54■■■□□ 2.96
GCAT-201ENST00000248924 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
GCAT-201ENST00000248924 BICRAQ9NZM4 1560 aa33.43■■■□□ 2.94
GCAT-201ENST00000248924 SHROOM4Q9ULL8 1493 aa33.01■■■□□ 2.88
GCAT-201ENST00000248924 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
GCAT-201ENST00000248924 EIF4G1Q04637 1599 aaKnown RBP32.54■■■□□ 2.8
GCAT-201ENST00000248924 CC2D2AQ9P2K1 1620 aa32.39■■■□□ 2.78
GCAT-201ENST00000248924 CECR2Q9BXF3 1484 aa32.2■■■□□ 2.74
GCAT-201ENST00000248924 SMARCA4P51532 1647 aa32.05■■■□□ 2.72
GCAT-201ENST00000248924 BAZ1AQ9NRL2 1556 aaPredicted RBP32.01■■■□□ 2.72
GCAT-201ENST00000248924 MROH2BQ7Z745 1585 aa31.87■■■□□ 2.69
GCAT-201ENST00000248924 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
GCAT-201ENST00000248924 SMARCA2P51531 1590 aa31.78■■■□□ 2.68
GCAT-201ENST00000248924 NCAPD3P42695 1498 aa31.76■■■□□ 2.68
GCAT-201ENST00000248924 PEG3Q9GZU2 1588 aa31.7■■■□□ 2.67
GCAT-201ENST00000248924 HMGXB3Q12766 1538 aa31.63■■■□□ 2.65
GCAT-201ENST00000248924 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
GCAT-201ENST00000248924 WIZO95785 1651 aa31.56■■■□□ 2.64
GCAT-201ENST00000248924 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
GCAT-201ENST00000248924 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
GCAT-201ENST00000248924 NESP48681 1621 aa31.03■■■□□ 2.56
GCAT-201ENST00000248924 LAMC3Q9Y6N6 1575 aa30.93■■■□□ 2.54
GCAT-201ENST00000248924 SUPT5HO00267 1087 aaKnown RBP30.88■■■□□ 2.53
GCAT-201ENST00000248924 CADPSQ9ULU8 1353 aa30.85■■■□□ 2.53
GCAT-201ENST00000248924 ERCC6Q03468 1493 aa30.84■■■□□ 2.53
GCAT-201ENST00000248924 CCDC88BA6NC98 1476 aa30.83■■■□□ 2.53
GCAT-201ENST00000248924 CFTRP13569 1480 aa30.7■■■□□ 2.51
GCAT-201ENST00000248924 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
GCAT-201ENST00000248924 KIF21AQ7Z4S6 1674 aa30.69■■■□□ 2.5
GCAT-201ENST00000248924 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
GCAT-201ENST00000248924 FANCD2Q9BXW9 1451 aa30.53■■■□□ 2.48
GCAT-201ENST00000248924 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
GCAT-201ENST00000248924 CEP164Q9UPV0 1460 aa30.48■■■□□ 2.47
GCAT-201ENST00000248924 CUX2O14529 1486 aa30.42■■■□□ 2.46
GCAT-201ENST00000248924 MRC2Q9UBG0 1479 aa30.4■■■□□ 2.46
GCAT-201ENST00000248924 WDR62O43379 1518 aa30.3■■■□□ 2.44
GCAT-201ENST00000248924 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
GCAT-201ENST00000248924 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
GCAT-201ENST00000248924 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
GCAT-201ENST00000248924 ABCC8Q09428 1581 aa30.01■■■□□ 2.4
GCAT-201ENST00000248924 CUX1P39880 1505 aa29.88■■■□□ 2.37
GCAT-201ENST00000248924 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
GCAT-201ENST00000248924 IFT140Q96RY7 1462 aa29.81■■■□□ 2.36
GCAT-201ENST00000248924 FGD5Q6ZNL6 1462 aa29.76■■■□□ 2.35
GCAT-201ENST00000248924 TARBP1Q13395 1621 aaKnown RBP29.73■■■□□ 2.35
GCAT-201ENST00000248924 WRNQ14191 1432 aaPredicted RBP eCLIP29.72■■■□□ 2.351e-6■■■■■ 58.5
GCAT-201ENST00000248924 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
GCAT-201ENST00000248924 RAD54L2Q9Y4B4 1467 aa29.7■■■□□ 2.35
GCAT-201ENST00000248924 SYNJ1O43426 1573 aa29.68■■■□□ 2.34
GCAT-201ENST00000248924 SOGA1O94964 1423 aa29.68■■■□□ 2.34
GCAT-201ENST00000248924 BIVM-ERCC5R4GMW8 1640 aa29.67■■■□□ 2.34
GCAT-201ENST00000248924 TOP2BQ02880 1626 aa29.66■■■□□ 2.34
GCAT-201ENST00000248924 EIF4G3O43432 1585 aaKnown RBP29.61■■■□□ 2.33
GCAT-201ENST00000248924 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.322e-7■■■■□ 24.2
GCAT-201ENST00000248924 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
GCAT-201ENST00000248924 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
GCAT-201ENST00000248924 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.31
GCAT-201ENST00000248924 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
GCAT-201ENST00000248924 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
GCAT-201ENST00000248924 GAPVD1Q14C86 1478 aa29.34■■■□□ 2.29
GCAT-201ENST00000248924 PBRM1Q86U86 1689 aa29.33■■■□□ 2.29
GCAT-201ENST00000248924 GRIN2BQ13224 1484 aa29.31■■■□□ 2.28
GCAT-201ENST00000248924 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
GCAT-201ENST00000248924 CHD1O14646 1710 aa29.24■■■□□ 2.27
GCAT-201ENST00000248924 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
GCAT-201ENST00000248924 FBLN2P98095 1184 aa29.2■■■□□ 2.26
GCAT-201ENST00000248924 OSCARQ8IYS5 282 aa29.2■■■□□ 2.26
GCAT-201ENST00000248924 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
GCAT-201ENST00000248924 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
GCAT-201ENST00000248924 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
GCAT-201ENST00000248924 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
GCAT-201ENST00000248924 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
GCAT-201ENST00000248924 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
GCAT-201ENST00000248924 FHAD1B1AJZ9 1412 aa28.99■■■□□ 2.23
GCAT-201ENST00000248924 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
GCAT-201ENST00000248924 IGF1RP08069 1367 aa28.94■■■□□ 2.22
GCAT-201ENST00000248924 RUSC2Q8N2Y8 1516 aa28.92■■■□□ 2.22
GCAT-201ENST00000248924 CUL7Q14999 1698 aa28.89■■■□□ 2.21
GCAT-201ENST00000248924 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
GCAT-201ENST00000248924 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
GCAT-201ENST00000248924 CEP170Q5SW79 1584 aa28.82■■■□□ 2.2
GCAT-201ENST00000248924 NUP160Q12769 1436 aa28.79■■■□□ 2.2
GCAT-201ENST00000248924 CARMIL1Q5VZK9 1371 aa28.78■■■□□ 2.2
GCAT-201ENST00000248924 RIMBP3CA6NJZ7 1639 aa28.76■■■□□ 2.2
GCAT-201ENST00000248924 RIMBP3BA6NNM3 1639 aa28.76■■■□□ 2.2
GCAT-201ENST00000248924 RIMBP3Q9UFD9 1639 aa28.76■■■□□ 2.2
GCAT-201ENST00000248924 ARHGEF11O15085 1522 aa28.76■■■□□ 2.19
GCAT-201ENST00000248924 RAPGEF2Q9Y4G8 1499 aa28.63■■■□□ 2.17
GCAT-201ENST00000248924 SHROOM2Q13796 1616 aa28.59■■■□□ 2.17
GCAT-201ENST00000248924 EEA1Q15075 1411 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms