RNA–Protein interactions for RNA: ENST00000610356.4

RDH13-223, Transcript of retinol dehydrogenase 13, humanhuman

TSL 1 (best) BASIC

Gene RDH13, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-223ENST00000610356 NISCHQ9Y2I1 1504 aa37.91■■■■□ 3.66
RDH13-223ENST00000610356 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
RDH13-223ENST00000610356 ZCCHC6Q5VYS8 1495 aaKnown RBP31.92■■■□□ 2.7
RDH13-223ENST00000610356 DCAF1Q9Y4B6 1507 aa31.33■■■□□ 2.61
RDH13-223ENST00000610356 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
RDH13-223ENST00000610356 SHROOM4Q9ULL8 1493 aa31.17■■■□□ 2.58
RDH13-223ENST00000610356 ABCC9O60706 1549 aa30.88■■■□□ 2.53
RDH13-223ENST00000610356 MYO15BQ96JP2 1530 aa30.84■■■□□ 2.53
RDH13-223ENST00000610356 NACADO15069 1562 aa30.58■■■□□ 2.49
RDH13-223ENST00000610356 SCRIBQ14160 1630 aa30.35■■■□□ 2.45
RDH13-223ENST00000610356 RB1CC1Q8TDY2 1594 aa30.26■■■□□ 2.43
RDH13-223ENST00000610356 SUPT5HO00267 1087 aaKnown RBP30.14■■■□□ 2.41
RDH13-223ENST00000610356 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
RDH13-223ENST00000610356 RSF1Q96T23 1441 aaPredicted RBP29.52■■■□□ 2.32
RDH13-223ENST00000610356 CECR2Q9BXF3 1484 aa29.43■■■□□ 2.3
RDH13-223ENST00000610356 BICRAQ9NZM4 1560 aa29.33■■■□□ 2.29
RDH13-223ENST00000610356 MROH2BQ7Z745 1585 aa29.31■■■□□ 2.28
RDH13-223ENST00000610356 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.27
RDH13-223ENST00000610356 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
RDH13-223ENST00000610356 WIZO95785 1651 aa29.1■■■□□ 2.25
RDH13-223ENST00000610356 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
RDH13-223ENST00000610356 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
RDH13-223ENST00000610356 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
RDH13-223ENST00000610356 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
RDH13-223ENST00000610356 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
RDH13-223ENST00000610356 ATAD2BQ9ULI0 1458 aa28.52■■■□□ 2.16
RDH13-223ENST00000610356 CCDC88BA6NC98 1476 aa28.49■■■□□ 2.15
RDH13-223ENST00000610356 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
RDH13-223ENST00000610356 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
RDH13-223ENST00000610356 TRIM41Q8WV44 630 aa28.31■■■□□ 2.12
RDH13-223ENST00000610356 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
RDH13-223ENST00000610356 NCAPD3P42695 1498 aa28.21■■■□□ 2.11
RDH13-223ENST00000610356 ABCC8Q09428 1581 aa28.02■■■□□ 2.08
RDH13-223ENST00000610356 CC2D2AQ9P2K1 1620 aa27.94■■■□□ 2.06
RDH13-223ENST00000610356 LOC105371045A0A1W2PR82 267 aa27.88■■■□□ 2.05
RDH13-223ENST00000610356 FAM9AQ8IZU1 332 aaPredicted RBP27.81■■■□□ 2.04
RDH13-223ENST00000610356 WRNQ14191 1432 aaPredicted RBP eCLIP27.8■■■□□ 2.04
RDH13-223ENST00000610356 CFTRP13569 1480 aa27.68■■■□□ 2.02
RDH13-223ENST00000610356 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
RDH13-223ENST00000610356 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
RDH13-223ENST00000610356 EEA1Q15075 1411 aa27.56■■■□□ 2
RDH13-223ENST00000610356 SOGA1O94964 1423 aa27.54■■■□□ 2
RDH13-223ENST00000610356 TOP2BQ02880 1626 aa27.53■■■□□ 2
RDH13-223ENST00000610356 CADPSQ9ULU8 1353 aa27.52■■■□□ 2
RDH13-223ENST00000610356 BIVM-ERCC5R4GMW8 1640 aa27.51■■□□□ 1.99
RDH13-223ENST00000610356 EHMT2Q96KQ7 1210 aa27.42■■□□□ 1.98
RDH13-223ENST00000610356 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
RDH13-223ENST00000610356 CUX1P39880 1505 aa27.39■■□□□ 1.98
RDH13-223ENST00000610356 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
RDH13-223ENST00000610356 FANCD2Q9BXW9 1451 aa27.24■■□□□ 1.95
RDH13-223ENST00000610356 LAMC3Q9Y6N6 1575 aa27.23■■□□□ 1.95
RDH13-223ENST00000610356 GOLGA3Q08378 1498 aa27.21■■□□□ 1.95
RDH13-223ENST00000610356 KIF21BO75037 1637 aa27.19■■□□□ 1.94
RDH13-223ENST00000610356 NESP48681 1621 aa27.19■■□□□ 1.94
RDH13-223ENST00000610356 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
RDH13-223ENST00000610356 TNIKQ9UKE5 1360 aa27.16■■□□□ 1.94
RDH13-223ENST00000610356 DNAJC5BQ9UF47 199 aa27.1■■□□□ 1.93
RDH13-223ENST00000610356 KIF27Q86VH2 1401 aa27.07■■□□□ 1.92
RDH13-223ENST00000610356 UBTFP17480 764 aaKnown RBP27.06■■□□□ 1.92
RDH13-223ENST00000610356 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
RDH13-223ENST00000610356 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
RDH13-223ENST00000610356 FGD5Q6ZNL6 1462 aa27.05■■□□□ 1.92
RDH13-223ENST00000610356 PDS5BQ9NTI5 1447 aa27.01■■□□□ 1.91
RDH13-223ENST00000610356 RAPGEF2Q9Y4G8 1499 aa26.98■■□□□ 1.91
RDH13-223ENST00000610356 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
RDH13-223ENST00000610356 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
RDH13-223ENST00000610356 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
RDH13-223ENST00000610356 PRXQ9BXM0 1461 aa26.95■■□□□ 1.9
RDH13-223ENST00000610356 CUX2O14529 1486 aa26.94■■□□□ 1.9
RDH13-223ENST00000610356 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.89
RDH13-223ENST00000610356 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
RDH13-223ENST00000610356 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
RDH13-223ENST00000610356 URB2Q14146 1524 aaKnown RBP26.87■■□□□ 1.89
RDH13-223ENST00000610356 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
RDH13-223ENST00000610356 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
RDH13-223ENST00000610356 CLIP1P30622 1438 aa26.78■■□□□ 1.88
RDH13-223ENST00000610356 HRCP23327 699 aa26.78■■□□□ 1.88
RDH13-223ENST00000610356 IGF1RP08069 1367 aa26.77■■□□□ 1.88
RDH13-223ENST00000610356 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
RDH13-223ENST00000610356 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
RDH13-223ENST00000610356 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
RDH13-223ENST00000610356 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
RDH13-223ENST00000610356 CUL7Q14999 1698 aa26.58■■□□□ 1.85
RDH13-223ENST00000610356 PPARGC1BQ86YN6 1023 aaKnown RBP26.58■■□□□ 1.85
RDH13-223ENST00000610356 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
RDH13-223ENST00000610356 RANGAP1P46060 587 aaPredicted RBP26.55■■□□□ 1.84
RDH13-223ENST00000610356 TARBP1Q13395 1621 aaKnown RBP26.54■■□□□ 1.84
RDH13-223ENST00000610356 WDR62O43379 1518 aa26.5■■□□□ 1.83
RDH13-223ENST00000610356 GAPVD1Q14C86 1478 aa26.5■■□□□ 1.83
RDH13-223ENST00000610356 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
RDH13-223ENST00000610356 ARAP1Q96P48 1450 aa26.47■■□□□ 1.83
RDH13-223ENST00000610356 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
RDH13-223ENST00000610356 ARHGAP35Q9NRY4 1499 aa26.41■■□□□ 1.82
RDH13-223ENST00000610356 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
RDH13-223ENST00000610356 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
RDH13-223ENST00000610356 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
RDH13-223ENST00000610356 APLP2Q06481 763 aa26.34■■□□□ 1.81
RDH13-223ENST00000610356 TTBK1Q5TCY1 1321 aaPredicted RBP26.34■■□□□ 1.81
RDH13-223ENST00000610356 CTTNBP2Q8WZ74 1663 aa26.33■■□□□ 1.81
RDH13-223ENST00000610356 AQRO60306 1485 aaKnown RBP eCLIP26.27■■□□□ 1.81e-9■■■■■ 45.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms