Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AC005332.3-201ENST00000589904 676 ntBASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AC140113.3-201ENST00000605663 199 ntBASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AL390719.2-201ENST00000606993 987 ntBASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AL138966.2-201ENST00000621997 464 ntBASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 AC073347.1-201ENST00000421633 2643 ntBASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRDV1A0A1B0GX56 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SPDYE15P-201ENST00000424157 909 ntBASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.85□□□□□ -0.03
TRDV1A0A1B0GX56 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 AC006277.1-201ENST00000624348 1610 ntBASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 STARP1-201ENST00000397973 869 ntBASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRDV1A0A1B0GX56 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms